CI01000016_01656995_01657299


Basic Information

Item Value
gene id CI01000016_01656995_01657299
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 1656995 ~ 1658390 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_01656995_01657299.mRNA
GCATAATGGTCCCGGTCCCTCAATCACTGCACAACCCTGTGAAGAGAGATCACATCGGTATTTTCCTGACCATTGCCTTGCTGGTCATAGCCATTTCATGTCTGCTAGGTGCTGGATGTGCATACAAAAACAACAGAGGCAGGGATGAAGAGAGCCTTCAGCAGAGATTCTCTTGAACTTTTTACAGTCTTTTTAACGTTATCATGGCACGGACTCATATTTGTATATAGCATAGGAATTGGAGATGCGCAGATACTAAATTTCACCACAGATAACCCATTATTTAAAATGATATCTGGCGATATTGATAGTTTGAGTTTTCTTAAAGAAAAAAAAAATCCCTCTCAACTAATGCTGTAAACTATAAAGGGAACCCTCTCACTTGGTACATTAATATTACAGATTAAAATTAACAACAGAACTATTATATATTATATATTCAGCTGCTATTTTTTTTTTCAGAGATAATAAACATTGGATGACTTTCCTGAGGTAAATGCAATGTTAAGTGACATTGCTCATAAGCTGTTTTGTTGTTTATCCACCCCCTTTTTGATTGACAGAATATAATTGGCTGATCGGTGATCACTAATAGGAATACTACATCAACTTTATATATGGTTTGTCCAGAGTATTACAGTTAACTAGAAACTTTTGTTACTTGAAATAAAATAACCGTTATCTGAAATAAGATCAAAATAGGCTAGTTGCCAAGAAAGAAAGTTTAACTTAATGTACTAAAATAACTAAAATTAAAATTATTTAAAAACTTAATTTTATACTAGACGTATAAAATTAAAAAAAAAAAAATCTTAAAGTAGAAAATATTTTAACTTATTATAACTAATGTGATTACTTAACAGTTTTGCACATTTATAGCTGTGTAAATGGAGACACATGAAAACACTTCATTTGGGTTTGATGTCTTATCCTCAGAACTTTTTTTAGTATTGTGTTAATATATCTATTTTTGTTTTTTTCTATGCTTCATATCTACCTCTGATGATTGTTTTATTGCTAGTCTAGTTTTTTTTTTTTTTGACCGTGTCACTGGACTGATACATAAAACAAAAATTTCTTCAAATTAAAGTATTATTTGTACAAAATGTTCTAACTATGCTGTTTTTTTTTTTTTAATTGATAATTTGTTTTTTTGTATAGTCGAAAGAAACTTGTGAAACAACCTTTTGTTCTATACTATAGAAAAAAAACATGACAGTGTCCTGGCAGAATAACCACTGTTGTAGTTCATTGTCATTTGTCAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_01656995_01657299.mRNA True 1267 mRNA 0.30 2 1656995 1658390

Neighbor

gene id symbol gene type direction distance location
CI01000016_01588035_01601276 RSPO2 coding upstream 55086 1587070 ~ 1601909 (+)
CI01000016_01563821_01567070 NA coding upstream 89466 1562398 ~ 1567529 (+)
CI01000016_01509959_01560806 EIF3E.L, EIF3EB, EIF3E, EIF3E.S, EIF3EA coding upstream 95873 1509959 ~ 1561122 (+)
CI01000016_01476236_01476607 NA coding upstream 180233 1476236 ~ 1476762 (+)
CI01000016_01408124_01408966 TMEM74 coding upstream 247830 1406636 ~ 1409165 (+)
CI01000016_01989129_01990437 NA coding downstream 330634 1989024 ~ 1990995 (+)
CI01000016_02000795_02079453 ADGRB1, ADGRB1A coding downstream 341819 2000209 ~ 2080896 (+)
CI01000016_02220464_02221013 NA coding downstream 562074 2220464 ~ 2221030 (+)
CI01000016_02235073_02261683 CEP162 coding downstream 576683 2235073 ~ 2262308 (+)
CI01000016_02337039_02343109 POGZB coding downstream 678649 2337039 ~ 2343109 (+)
G93624 NA non-coding upstream 102969 1496393 ~ 1554026 (+)
G93565 NA non-coding upstream 187640 1462117 ~ 1469355 (+)
G93567 NA non-coding upstream 195017 1461600 ~ 1461978 (+)
G93547 NA non-coding upstream 207401 1394698 ~ 1449594 (+)
G93711 NA non-coding downstream 255407 1913797 ~ 1942317 (+)
G93780 NA non-coding downstream 310148 1968538 ~ 1978432 (+)
G93777 NA non-coding downstream 381199 2039589 ~ 2045283 (+)
G93794 NA non-coding downstream 435562 2093952 ~ 2094182 (+)
G93779 NA non-coding downstream 446516 2104906 ~ 2105133 (+)
G93406 NA other upstream 729463 905400 ~ 927532 (+)
G95439 NA other downstream 2203785 3862175 ~ 3862305 (+)
G95648 NA other downstream 2614246 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 3176168 4829592 ~ 4837457 (+)
G95792 NA other downstream 3561490 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 3747479 5405791 ~ 5407963 (+)

Expression


Co-expression Network