CI01000016_02120276_02136906


Basic Information

Item Value
gene id CI01000016_02120276_02136906
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 2120156 ~ 2137185 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_02120276_02136906.mRNA
AGTGTTGAGCTCCATTCAATGAAGGTAGAACAGAGGTTGATTGAGAGTCTACGCCACTGAAGGACATTTAAAAGTCATCGCCCAAGTCCCCTCTACTCCTCAACCTCTGCCTGATGGGACTTAAGAAGTCATTTCAAAGTGCAATTCATGTTTGATGACTTTATTGATTTTCCTATCCCGTCTCCCTTCCTGCCCCCTTCCTCCCAGCGAGGGTCTCTGCAGAGTGAAATGTACCTACAGTTACAGCTTGCTGAAGCTTCAGTTCGCTGCCCCTAAATTATGGCCTTCCGTGCTGAGAACGACACAAGATGCGTAGGGAAAAATAAAGATGCAATTAACCCGAGTAAGAACTCGCAACCACCACCAGGCTCATCATGTTCTAGTTGGCTCTCTTCAAATAGCAGAGCTGTTGACTTCATGTCACCTGGGCGCGTTTCGGGACTGATCCCGCCAATGTTACTAGGTCCCCATCCGGGGATCGATCCCGGGACGTGTTTGTGTTCACGCAGAAGGCACTCTGGCAATTTTACGGGATCAATGCACTGTGTGAAAGGGGCTATACTGATGACTTTTTTTGCAATCCATGTTTGCTCAGGACAAAATGAAGAGAAATACGCACAACTGAGACTAAGAACACACTGTTCCTCCTCTCGTTTCTCTCCAATGGAGAATTTCATTATTCTATGTCCATTCTCCCAGTTCCGTCAGGAATATAGATCTTTATCGGGCAGGAAATGGTTTTGGGTGGAGGATCGAGAGGATTCACTGCACACAAGCACATGCAGTTCCTGTCAGCTGACGACTGGTGGCACTGCATTATCAGCCAAAAGCCTCGGGGGCAGCGTGTGTATCATCTTCAAACAAACGGTTCACCTTTGTAAAAACACTGCGGCCTGCCTGCGGCCTGAAATCCTATTAAATCTCCCTCTCTCTTTCTCCAGCAAGCTGACAGGAGTGTGTGAATATGGAGAGAGTCTGGCTTATTCGGAGGCACAGAGAGAGGCAAAGAAAAACAAAGACTATGACACAACACTGATATCTCGATGTAAAACCACAATTAAGCCTAACTGCAGACGGCATATGCAGCCTATTGGTGTCGGGCGGGCCCTTCCGGCGTTTTCCCCTCTGAAAGACCCTGGTTTGTTTTTGGCAAAGCAACTGTTTAGGAGGATGGAGTATTCACTGTTGGAATACAAATGGTTCTCTCAGGCTTGGACTTTAGAGTTGCTGAGTGATACGGAAGTAGTCGCCTGTGTGACAGTGATTTTAAGGAGAAAAATATTGCATTTAATGTTGTCCATGATTTTGATTAGTGTTGTCATGATCTAAATTTGAAAACAATACCAGAACAAATTCACAGTTCTCAATAGTATAGCTATCAGAAAACTATTGGAACTATTTAACCATTTAAACTATTTGAAAAAAAAAAAAAAAAAAAAAAGTATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_02120276_02136906.mRNA True 1449 mRNA 0.44 10 2120156 2137185

Neighbor

gene id symbol gene type direction distance location
CI01000016_01835869_01947822 TSNARE1 coding downstream 172314 1835745 ~ 1947842 (-)
CI01000016_01689633_01693021 NA coding downstream 426484 1689495 ~ 1693672 (-)
CI01000016_01659416_01671969 NA coding downstream 448187 1658974 ~ 1671969 (-)
CI01000016_01653014_01654553 NA coding downstream 465597 1652387 ~ 1654559 (-)
CI01000016_01577710_01581289 NA coding downstream 538477 1576406 ~ 1581679 (-)
CI01000016_02263634_02265929 MRAP2, MRAP2A coding upstream 126060 2263245 ~ 2265929 (-)
CI01000016_02288848_02311105 PLEKHO1B coding upstream 150112 2287297 ~ 2311105 (-)
CI01000016_02328065_02334778 NA coding upstream 190627 2327812 ~ 2335736 (-)
CI01000016_02467451_02477544 NA coding upstream 330266 2467451 ~ 2477544 (-)
CI01000016_02568824_02575674 DECR1 coding upstream 431425 2568610 ~ 2575674 (-)
G94634 NA non-coding downstream 41747 2072464 ~ 2078409 (-)
G94510 NA non-coding downstream 382583 1733079 ~ 1737573 (-)
G94449 NA non-coding downstream 496154 1623032 ~ 1624002 (-)
G94434 NA non-coding downstream 551874 1568055 ~ 1568282 (-)
G94674 NA non-coding upstream 13178 2150363 ~ 2150589 (-)
G94748 NA non-coding upstream 43069 2180254 ~ 2180460 (-)
G94751 NA non-coding upstream 60080 2197265 ~ 2197495 (-)
G94768 NA non-coding upstream 105038 2242223 ~ 2249672 (-)
G94796 NA non-coding upstream 296007 2433192 ~ 2446161 (-)
G94786 NA other upstream 133651 2270836 ~ 2276275 (-)
G95070 NA other upstream 848075 2985260 ~ 2985641 (-)
CI01000016_03647744_03675574 NA other upstream 1498422 3647653 ~ 3675585 (-)
CI01000016_03921124_03930996 NA other upstream 1728576 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 2775523 4918975 ~ 4922518 (-)

Expression


Co-expression Network