CI01000016_02467451_02477544


Basic Information

Item Value
gene id CI01000016_02467451_02477544
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 2467451 ~ 2477544 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_02467451_02477544.mRNA
TATCGGGACAGTGCTGGCAGGCCGCAACCTACTCGGAGAGCGTGGTGTCTCCGGAGCTGAGGAGCAGCAGTATTTTACGGGTTCCGGATGTGTCATCTCTGGCCCAGTGTGCGGGGGCCTGCTGTGATCTCCCGGGCTGTGACCTGGCCTGGTTTTTTGAGCGCCGCTGCTATGTGCTCAGTTGTCAGCGAAAAGAGAACTGCCAGCCAAAGCAAAGACCTGGTACTGAATCTCTCTTGGCCTTTTTGCAACGTGGGCCCCCACAGACACTGGTTCTGCAATCCCTGGTCCGAGGAGAGTCCTTCCCAAACCACTGGCAGCCTCTGCCCAGGCACAGGGGCTCTGAGGACCCCATGAAGGACCTTGCCTTGTTGGAAGGCATTCGAGATTTGGACAACACTGATGCTGAGTATGCCGAGAGTTTTCGAAGTTTGGAAGACAAAAGAGCTGAAGACAGGGGTGGTGCAGCTGTAGAACAAGAAGAAAGCCCTGGGCTATATGCTTGGCCACTTGTTCAAGGAAAAGAAGAATTCAACCAATCAGAAACAGAGAGAGTTGGTGAAAGACTGATGACAGTGCAGGGTTCTCTTGAAAGTAGCACCTTTTCCCCAAGTAACTTACCAGAAATGGGAAATGAAAGCAAATCATCTCTTGTTGAAGCAGAATCCAATCTTACGCCCCCAACCACTGCACTTAACTTGATGGTGAGTGTTGGTTACAGATTCATGCATAATATTTCCAGACACACTAAAGACATTAAAAACAGACAGGTTGAAGAAGACCCACACAACATTTCGTCTGCAACTCCTTCACCTAATGTCCTGCAAGACATCAGCACAGAGCCCTCGAGGTTCAGCGCTGTCAGTAGTTTCTTCACTACTCCACTCAGCACTGAAGCCACATCGCAGATGATCTCAGAAGAGCAAGAGGCTCCTTACACATATGAGTGGACTTTGGTAACGTCACCTGATGGACACCATGGGGTGATGGAGGGGCGGCACAACAAATCTGTCAAAATTTCAGAACTTTTCATTGGTGTCTATGCTGTCAGAGTGAGAGTGAAAGCACAACAAGCATATGGAGAAAGTTCTGTGAACTTTACAGTACACCCTGCAGTGAATGTAAATAAGCCTCCTGAAGCCGTCACTCTACCCAAGAGCCAAGATGTGCTTTTTCAGGAAGGTTCCATCTTCATCATTAATGGCAGTCAGAGTGTGGATGATGTTGGAGTAGTCAGTTACCTGTGGGAGAAGGTGGACGGCCCTTTTTGGAAACCTGAGGGCCCTGTTGACACACCTACACTGCAGCTACAGAATCTTTCACCAGGAGAATATACCTTCAAGCTGACAGTGTCTGATTCTGATGGACTGACTGACTCCAGCACTGCCACTGTAAGGGTCAGCAGCCCAAAAGATGACCCTCCTCGGGCCAGAGCAGGCAGTGACCGGGTCATCACCCTGCCTCTCAACCACCTCACCTTGTTGGGTAACCACAGCACTGATGACCATGCCATTACCAGCTACCTCTGGACTCTCCATCCCAGCAGCCTGACCCAAAAGGTCACTATGCAGGATGTGAGATCACCTTTCCTGCAGCTCTCTGATCTCCAGGAGGGTCGGTACACGTTTCAGCTGACAGTCACTGACTCCAGAGGTCAACAGGATTCAGACACCATCTCAGTTACTGTGCTCCCTGCAAACAAAGCACCAGTCGCTATAACAGGGCCAGAAAGGCAACTCTTCCTCCCAGTCAGCAGCATCACATTGAATGGCAGCGGCAGCACTGATGATCAGGCCATCATCAGTTACCAATGGGACATGATCAGTGGCCCTCCAGGCTTGAAGATAAAAGATGGCAATAAAGCGGTTGCCATAGCAACTGACCTGAGATCTGGGAATTACAAGTTCAAACTGACTGTGACAGATCAGCAGGGAGAAACAGACAGCGCAGTCCTTACCGTCACTATTAAAGAAGCCAAAAGCCTTCCACTGGTCGCTCATGCAAGCGGCAGCCACACGCTCACTCTGCCCAACAACTCTCTGGTGCTCAGGGGCTCGGCTTCCAACAGTGGAACAGCAAACGTGTCCTTTCTTTGGGTCCGAGATGAACAGAGTCCTGCAGCTGGGGATGTTTTATATGGCTCAGATCACGAGGCCTTCCTTTACCTCACCAATCTGGTAGAAGGAACGTACCTATTCCAACTCCGGGTCACTGATGCCCAGGGCCGCTCGAGCATGGCTACGGCCACTGTGGAAGTACGGCCTGATCCACGTGAGCGAGAGGAGGTGGAGCTTGAGCTGCAGGTGGGCATGGCTCAGGTCAGCCAGCAGCAGAAGGACACAGTAGTGAGACAGCTGGCCGCCCTACTGCATGTTCTGGACTCAGACATTGCACTGAAGGACCTGCACGGCCAGTCGGACATCAGCACAGTATTTAGGTTCTCAGTGCAGGGTCCTGATGGTACGATACCAGGCCCAAAACTCGCTCGTCTGCTGAGAAACCAGCTGTTGCGAGAGAAAACCGACTTCTTGCTCTTTAAGGTCTTAAGAGTGGACACAGTTATGTGTTTGCTGCTGTGTTCTGGGCGTGGTCAGTGTGACCCCATTACAAAGAGCTGTTCCTGTGACCCTCTTTGGATGGAGAACCCCATTCGCCGTTTCCTTGAAGATGGCGAGAGCAATTGCGACTGGAGCGTATTGTATGTCACAATCTCTTGTTTTGTGACAATCATTTTCCTCTTGTCAGTCAGCTGGATTTGCATCTGCTGCTGTAAAAGAGGGAGACGCACCAAAGTGAGAAAGAAAACCAAGTACACAATACTGGACAACATGGATGAGCAGGAGAGGATGGAACTTCAGCCAAAGTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_02467451_02477544.mRNA True 2868 mRNA 0.51 17 2467451 2477544

Neighbor

gene id symbol gene type direction distance location
CI01000016_02328065_02334778 NA coding downstream 131715 2327812 ~ 2335736 (-)
CI01000016_02288848_02311105 PLEKHO1B coding downstream 156346 2287297 ~ 2311105 (-)
CI01000016_02263634_02265929 MRAP2, MRAP2A coding downstream 201522 2263245 ~ 2265929 (-)
CI01000016_02120276_02136906 NA coding downstream 330266 2120156 ~ 2137185 (-)
CI01000016_01835869_01947822 TSNARE1 coding downstream 519609 1835745 ~ 1947842 (-)
CI01000016_02568824_02575674 DECR1 coding upstream 91066 2568610 ~ 2575674 (-)
CI01000016_02589744_02622875 NA coding upstream 111931 2589475 ~ 2622875 (-)
CI01000016_02679833_02695963 SH3BP5B, SH3BP5 coding upstream 200994 2678538 ~ 2695963 (-)
CI01000016_02802780_02815803 NA coding upstream 325055 2802599 ~ 2815803 (-)
CI01000016_02817855_02829699 NA coding upstream 340311 2817855 ~ 2830457 (-)
G94796 NA non-coding downstream 21290 2433192 ~ 2446161 (-)
G94768 NA non-coding downstream 217779 2242223 ~ 2249672 (-)
G94751 NA non-coding downstream 269956 2197265 ~ 2197495 (-)
G94748 NA non-coding downstream 286991 2180254 ~ 2180460 (-)
G94674 NA non-coding downstream 316862 2150363 ~ 2150589 (-)
G95091 NA non-coding upstream 44177 2521721 ~ 2522003 (-)
G95100 NA non-coding upstream 50483 2528027 ~ 2537970 (-)
G95102 NA non-coding upstream 64039 2541583 ~ 2541802 (-)
G95103 NA non-coding upstream 64429 2541973 ~ 2542218 (-)
G95061 NA non-coding upstream 103714 2581258 ~ 2581720 (-)
G94786 NA other downstream 191176 2270836 ~ 2276275 (-)
G95070 NA other upstream 507716 2985260 ~ 2985641 (-)
CI01000016_03647744_03675574 NA other upstream 1158063 3647653 ~ 3675585 (-)
CI01000016_03921124_03930996 NA other upstream 1388217 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 2435164 4918975 ~ 4922518 (-)
CI01000016_05325805_05330265 COX6B2 other upstream 2847975 5325519 ~ 5332874 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location