Item | Value |
---|---|
gene id | CI01000016_02741163_02753993 |
gene name | STK40 |
gene type | coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000016 |
NCBI id | null |
chromosome length | 12175457 |
location | 2741163 ~ 2754053 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
symbol | description |
---|---|
stk40 | Predicted to enable ATP binding activity; protein serine kinase activity; and protein threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. Predicted to be located in cytoplasm and nucleus. Is expressed in axis; hindbrain neural plate; mesoderm; optic primordium; and optic vesicle. Orthologous to human STK40 (serine/threonine kinase 40). |
id | name | namespace |
---|---|---|
GO:0006468 | protein phosphorylation | biological_process |
id | description |
---|---|
K16312 | STK40, SHIK; serine/threonine-protein kinase 40 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
CI01000016_02741163_02753993.mRNA | True | 1494 | mRNA | 0.50 | 12 | 2741163 | 2754053 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000016_02722831_02730864 | OSCP1B, OSCP1 | coding | upstream | 9585 | 2722831 ~ 2731578 (+) |
CI01000016_02719966_02722011 | MRPS15, PL8L1 | coding | upstream | 18972 | 2719966 ~ 2722191 (+) |
CI01000016_02714495_02719654 | NA | coding | upstream | 21417 | 2714412 ~ 2719746 (+) |
CI01000016_02662862_02676190 | CAPN7, CAN7 | coding | upstream | 64865 | 2661658 ~ 2676298 (+) |
CI01000016_02576551_02588698 | PIK3R4 | coding | upstream | 152043 | 2576551 ~ 2589120 (+) |
CI01000016_02793868_02796984 | EVA1BA | coding | downstream | 39815 | 2793868 ~ 2797333 (+) |
CI01000016_02876373_02882129 | NA | coding | downstream | 122134 | 2876187 ~ 2882148 (+) |
CI01000016_02918064_02918435 | NA | coding | downstream | 163711 | 2917764 ~ 2918540 (+) |
CI01000016_02965137_02979305 | SCMH1 | coding | downstream | 211084 | 2965137 ~ 2979509 (+) |
CI01000016_03050072_03055313 | CTPS1A, CTPS1, CTPS1B | coding | downstream | 294489 | 3048542 ~ 3055370 (+) |
G94901 | NA | non-coding | upstream | 6918 | 2733748 ~ 2734245 (+) |
G94898 | NA | non-coding | upstream | 49152 | 2691683 ~ 2692011 (+) |
G94874 | NA | non-coding | upstream | 196158 | 2544751 ~ 2545005 (+) |
G94850 | NA | non-coding | upstream | 232272 | 2508643 ~ 2508891 (+) |
G94848 | NA | non-coding | upstream | 237721 | 2503127 ~ 2503442 (+) |
G94904 | NA | non-coding | downstream | 58290 | 2812343 ~ 2812551 (+) |
G94905 | NA | non-coding | downstream | 62036 | 2816089 ~ 2816299 (+) |
G94858 | NA | non-coding | downstream | 63334 | 2817387 ~ 2822216 (+) |
G94906 | NA | non-coding | downstream | 76687 | 2830740 ~ 2832069 (+) |
G94908 | NA | non-coding | downstream | 81339 | 2835392 ~ 2835705 (+) |
G93406 | NA | other | upstream | 1813631 | 905400 ~ 927532 (+) |
G95439 | NA | other | downstream | 1108122 | 3862175 ~ 3862305 (+) |
G95648 | NA | other | downstream | 1518583 | 4272636 ~ 4273905 (+) |
CI01000016_04829592_04837305 | NA | other | downstream | 2080505 | 4829592 ~ 4837457 (+) |
G95792 | NA | other | downstream | 2465827 | 5219880 ~ 5225941 (+) |
CI01000016_05405791_05407797 | AICDA | other | downstream | 2651816 | 5405791 ~ 5407963 (+) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
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