CI01000016_03072793_03080040


Basic Information

Item Value
gene id CI01000016_03072793_03080040
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 3072728 ~ 3080040 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_03072793_03080040.mRNA
GCTGCAAAGGTGTTGCAGGAGAAATCTGGGGCTGGCATGGACAAGGCTACCGTGATACCTCTGTATTATGCAAAGTTGCAATCCATGCGGGGGTTATTTCAGACAGTTTGGGGGGCATGATCAACGTGTCTCTGCAGAGGGGCATTACCTTGTATGAGTCGAACTTCTCTAATGGAGTACTGTCGAAAACCGGTTCCTTGTCAGATAAACGGCTTGTCTTCCAGAGAGAGTGTGACAGGGAGCTAACAGTGGTGGCCTATAACACTTCTTCAGTGTGGGAGGAGGTGAACAGACTAGGACAGAAGGTCTCCTGGTCTCCAGGACATGAGGGCTCTCAGTGGGCTGCAAGCTCTGGGGACCAGCAACCCTGGATGGAGCTTGAGCTGTGGAACAGGAGTAGTGTCACAGGCATCATAACAAAGGGTACACCACATTACTACATTGAATCGTACTCCCTCATGTTCAGCAAAGACCGCAAAAACTGGAAGAAGTGGCATATCAGGGCCTCTGCGCAGGTTCAAGTGTTAGGCTGCCCTTCTGCCCCCCTCAGATCGCGTTCCTATGGAGATGGCTGTCAGGGTTTCCACGGGAAGAAGCTTCCGTGCACAAACCCAGAGCTTGTATCTTACCCTCTGGTTCGGAACATCCACGATGCTCTCCCCAGCCCTCCTCTCAATGACTATGCTGAGCCTGATGTAGTAGCAGGTGGGCAGATGATGGGACTCACATTCCGACCCCCATTGGAGGAGGGCTATACCATCCCCTTCACCTTCAACCACTACGACACCCCCGGACAACTTCCCGAATACACCGATCCCCTACCACCCGAACCAGAATATGCGACACCCTTCGGCGAAATGCCCACAGACTCAACACTGGACAGCCGACAAAATCTACCGGTGTGTCGATCTGCACAGGGTGCAAGAGCAGAGCTGGGCAAACAACAGTATGACTGCCCTGCCCACAGAGTGATCTCAAACGGGTACTGTACTCCAGTCTCACATGGTACTAGCCAACATAAGGCTAGCGTGATCTACTTTGAGCCCCAGACGGTAGAACCACTATTGCACACATACCATGAGCCACTTTGAGTCAATATGGAATCTCGAAGCAAATTTGTGCTGTTATACTGCTGTTTATAATGTAACCTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_03072793_03080040.mRNA True 1156 mRNA 0.51 8 3072728 3080040

Neighbor

gene id symbol gene type direction distance location
CI01000016_03064633_03068201 NA coding downstream 3636 3064562 ~ 3069092 (-)
CI01000016_03062846_03063013 NA coding downstream 9456 3062846 ~ 3063272 (-)
CI01000016_03060171_03060612 RAB42B coding downstream 12116 3059543 ~ 3060612 (-)
CI01000016_02991852_02994428 CITED2, CITED4B coding downstream 78300 2991220 ~ 2994428 (-)
CI01000016_02936606_02957342 NA coding downstream 114853 2936109 ~ 2957875 (-)
CI01000016_03082653_03084658 NA coding upstream 2346 3082386 ~ 3084658 (-)
CI01000016_03322103_03326683 NA coding upstream 241963 3322003 ~ 3330762 (-)
CI01000016_03555967_03558776 C1H1ORF43, CUNH1ORF43 coding upstream 475260 3555300 ~ 3559186 (-)
CI01000016_03647744_03675574 NA coding upstream 567613 3647653 ~ 3675585 (-)
CI01000016_03719404_03722988 NA coding upstream 639127 3719167 ~ 3723058 (-)
G95191 NA non-coding downstream 22002 3049891 ~ 3050726 (-)
G95199 NA non-coding downstream 28862 3043667 ~ 3043866 (-)
G95181 NA non-coding downstream 53658 3018794 ~ 3019070 (-)
G95172 NA non-coding downstream 194989 2877531 ~ 2877739 (-)
G95166 NA non-coding downstream 207597 2864769 ~ 2865131 (-)
G95203 NA non-coding upstream 11325 3091365 ~ 3091751 (-)
G95210 NA non-coding upstream 25720 3105760 ~ 3106448 (-)
G95313 NA non-coding upstream 244327 3324367 ~ 3324682 (-)
G95315 NA non-coding upstream 245872 3325912 ~ 3326175 (-)
G95070 NA other downstream 87087 2985260 ~ 2985641 (-)
G94786 NA other downstream 796453 2270836 ~ 2276275 (-)
CI01000016_03921124_03930996 NA other upstream 785721 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 1832668 4918975 ~ 4922518 (-)
CI01000016_05325805_05330265 COX6B2 other upstream 2245479 5325519 ~ 5332874 (-)
CI01000016_05412782_05415867 NA other upstream 2332219 5412248 ~ 5415906 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010088 si:dkey-34d22.1 coding NC_007127.7 CM002900.2 35343493 ~ 35379565 (+)