CI01000016_03082653_03084658



Basic Information


Item Value
gene id CI01000016_03082653_03084658
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 3082386 ~ 3084658 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000016_03082653_03084658.mRNA
GCGATGGGTGTGGACATACAGTCCTCAGTCCCACCAGTGGCACACTGACCTCGCTGAACTTCCCGGGAACCTACCCTAACCACACCCGGTGTGAGTGGAGCCTAAGGGTAGCGAAGGGCCAGACGCTGCTCTTGACCTTTGGGGACTTTGATTTGGAGTGGAGCCAAGACTGCATATCTGGCTCTCTTACCATCACAGACACCAGTGGAGCCACTAGAGTGGGTCCTCTGTGTGGGCAGTTGTCCACCACAAATAGGAATATATCTGTGAGTACTAATGAAGTAACAGTGCGTTTCATCTCTGGCACTCACCGTTCAGGACGGGGCTTTGTCCTTTCCTATTCAACCAATCAGCACTCAGGTAATGGCTCGTGTCCTGCAACACAACACTTCCCGCTCCATCCCACATCACCTAAACAGTAAACAAAAAAGGAATCCTTATCTCTCAACAAAATAAGAGCTAATAGCGTACACTATGTGGCTAAATGGATCTTTTTGCTCTGAACTTGTTGTATATGATCAGAGTAAACACACCAGGGACTGTTTGTACAGCTTACTCAGTAAACAGCACTTCATCTGACTCTGGGAGTGGAAGTAGTTCCCATCCTAATCTCAACTACTGTTTACACTTGTTTCCAACATCATATGTAAACTGCTTTCCTGGAGGTTGTGCGCAGATCGCTAAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000016_03082653_03084658.mRNA True 689 mRNA 0.47 2 3082386 3084658

Neighbor


gene id symbol gene type direction distance location
CI01000016_03072793_03080040 NA coding downstream 2346 3072728 ~ 3080040 (-)
CI01000016_03064633_03068201 NA coding downstream 13294 3064562 ~ 3069092 (-)
CI01000016_03062846_03063013 NA coding downstream 19114 3062846 ~ 3063272 (-)
CI01000016_03060171_03060612 RAB42B coding downstream 21774 3059543 ~ 3060612 (-)
CI01000016_02991852_02994428 CITED2, CITED4B coding downstream 87958 2991220 ~ 2994428 (-)
CI01000016_03322103_03326683 NA coding upstream 237345 3322003 ~ 3330762 (-)
CI01000016_03555967_03558776 C1H1ORF43, CUNH1ORF43 coding upstream 470642 3555300 ~ 3559186 (-)
CI01000016_03647744_03675574 NA coding upstream 562995 3647653 ~ 3675585 (-)
CI01000016_03719404_03722988 NA coding upstream 634509 3719167 ~ 3723058 (-)
CI01000016_03834829_03843163 ZNF687 coding upstream 749842 3834500 ~ 3843266 (-)
G95191 NA non-coding downstream 31660 3049891 ~ 3050726 (-)
G95199 NA non-coding downstream 38520 3043667 ~ 3043866 (-)
G95181 NA non-coding downstream 63316 3018794 ~ 3019070 (-)
G95172 NA non-coding downstream 204647 2877531 ~ 2877739 (-)
G95166 NA non-coding downstream 217255 2864769 ~ 2865131 (-)
G95203 NA non-coding upstream 6707 3091365 ~ 3091751 (-)
G95210 NA non-coding upstream 21102 3105760 ~ 3106448 (-)
G95313 NA non-coding upstream 239709 3324367 ~ 3324682 (-)
G95315 NA non-coding upstream 241254 3325912 ~ 3326175 (-)
G95070 NA other downstream 96745 2985260 ~ 2985641 (-)
G94786 NA other downstream 806111 2270836 ~ 2276275 (-)
CI01000016_03921124_03930996 NA other upstream 781103 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 1828050 4918975 ~ 4922518 (-)
CI01000016_05325805_05330265 COX6B2 other upstream 2240861 5325519 ~ 5332874 (-)
CI01000016_05412782_05415867 NA other upstream 2327601 5412248 ~ 5415906 (-)

Expression



Co-expression Network