XLOC_007907


Basic Information

Item Value
gene id XLOC_007907
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 27698025 ~ 27714037 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016407
CAGTGGTGTGTATGAACAGTCTCTGAGATTGAAATTCTTCGCAGTTGTCTCCTGGTGGCGTCCTTCACTATAGTCTCCTTCATGCACTGTCATTTTTGACAAAGGTCCTGAAAGAAATATAGGATGGTCCTATCATCCTGTTCCTTTTCATCCTGTGGGAACCAattggattgttggaagatgGACAAGCCTAACAACACTGAGGAAGACAGATGAATGCATGAAGACAGACCCGCACTAATACCCCCACCCCAGAGGCATAATGTGACCAGAAGGGAAGAAAACTAGAAAACTAGTTTTGAGGGGGCATGGAAGGTTATGGAAGGTTCTTtcctaata

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016407 True 339 lncRNA 0.44 2 27698025 27714037

Neighbor

gene id symbol gene type direction distance location
XLOC_007906 CR854833.1 coding downstream 141403 27556486 ~ 27556622 (-)
XLOC_007905 NA coding downstream 358586 27322219 ~ 27339439 (-)
XLOC_007903 pcdh11 coding downstream 400902 26995114 ~ 27297123 (-)
XLOC_007904 CT990607.1 coding downstream 522184 27175726 ~ 27175841 (-)
XLOC_007902 NA coding downstream 901312 26776218 ~ 26796713 (-)
XLOC_007908 NA coding upstream 273426 27987463 ~ 28005263 (-)
XLOC_007909 tsc22d3 coding upstream 284719 27998756 ~ 28052551 (-)
XLOC_007910 CU019650.1 coding upstream 414121 28128158 ~ 28128278 (-)
XLOC_007911 nek12 coding upstream 712565 28426602 ~ 28432699 (-)
XLOC_007912 nxt2 coding upstream 745402 28459439 ~ 28473639 (-)
XLOC_007641 CU855896.1 misc downstream 25290185 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 25290594 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 25290953 2406945 ~ 2407072 (-)
XLOC_007901 BX571940.1 non-coding downstream 982430 26715192 ~ 26715595 (-)
XLOC_007915 NA non-coding upstream 863436 28577473 ~ 28580808 (-)
XLOC_007916 NA non-coding upstream 880148 28594185 ~ 28596730 (-)
XLOC_007917 NA non-coding upstream 1197872 28911909 ~ 28915186 (-)

Expression


Co-expression Network