XLOC_007908


Basic Information

Item Value
gene id XLOC_007908
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 27987463 ~ 28005263 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016408
GTCGCATCTCTGGCTGTGTCTACTCTCTCATAGACTGACCGTTCATATACTGCCGCCGCCATGAGTTTGTCACCTCTCTACTCACCTATTCTGTTTAAGCGGAGAGACAGGCGGGCTTTGGAAAACACTGTGAATCGCTGTCTGTGTGTGAGCTGGTACTCCTGTGGCACCAGCCGCATAAAGAATGTGCCTGGAACATCTTATTCTGACCAAGTGGGGCAGAACAAAGACCACCAGCATGAGCTGAGGATTTGAGAGGAAAGCCTCAAATTCAGGGTCTGACCACGGGACAAACACAGCTTGTTTTTCTGCACTGACATGTGTCAAAGAGGGAGGAAGTGAAGTGCACTTATTACATAACTGAAACCTTGTATGATAAACTCAAGAACACCTGAAGATAGCCTTCTGGGATTTGTTTAGCTAGATTGGATAACATAATGTGTACTATGTTTAATGTGTTATCTATGACTCCTTTTAATTAAAGGGTGAGTTATGTGATCCAGATTGTTAACCCTATActtatatattgtaaaaatgatACATATAACCAAATATTAGGCTTGTTGTTAGTCATTAGGATTGTGCTTACATTAGATTACAGGTTCAAAACTTTGTAAGTTTCTCAATTCCTATTAGCAtcagattttaaataaataaacaattaaattatacactgtaaaaaatatccgttAACTAACAGGTTCCAAATTtcttgattgacattttcccccATTAATTTatagttatgaattgcattacagAACTTAAACTCTGGTCTTGGGAAAACTCAGtgctgcagtttaacaaagtgacttttattgacattttagcagtttgaaacaatattttgtataagaaataaaatggaattaagtctgtaaaataacagaaaatttactttattgttagttttttagatatttatttttagtataaaTCCAGATATCAATATATACATTCA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016408 True 961 lncRNA 0.35 2 27987463 28005263

Neighbor

gene id symbol gene type direction distance location
XLOC_007907 NA coding downstream 273426 27698025 ~ 27714037 (-)
XLOC_007906 CR854833.1 coding downstream 430841 27556486 ~ 27556622 (-)
XLOC_007905 NA coding downstream 648024 27322219 ~ 27339439 (-)
XLOC_007903 pcdh11 coding downstream 690340 26995114 ~ 27297123 (-)
XLOC_007904 CT990607.1 coding downstream 811622 27175726 ~ 27175841 (-)
XLOC_007910 CU019650.1 coding upstream 122895 28128158 ~ 28128278 (-)
XLOC_007911 nek12 coding upstream 421339 28426602 ~ 28432699 (-)
XLOC_007912 nxt2 coding upstream 454176 28459439 ~ 28473639 (-)
XLOC_007913 zgc:113364 coding upstream 524890 28530153 ~ 28534563 (-)
XLOC_007914 insb coding upstream 557818 28563081 ~ 28568152 (-)
XLOC_007641 CU855896.1 misc downstream 25579623 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 25580032 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 25580391 2406945 ~ 2407072 (-)
XLOC_007902 NA non-coding downstream 1190750 26776218 ~ 26796713 (-)
XLOC_007915 NA non-coding upstream 572210 28577473 ~ 28580808 (-)
XLOC_007916 NA non-coding upstream 588922 28594185 ~ 28596730 (-)
XLOC_007917 NA non-coding upstream 906646 28911909 ~ 28915186 (-)
XLOC_007918 CABZ01048945.1 non-coding upstream 1347744 29353007 ~ 29353123 (-)

Expression


Co-expression Network