CI01000016_04300720_04301736


Basic Information

Item Value
gene id CI01000016_04300720_04301736
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 4300649 ~ 4303507 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_04300720_04301736.mRNA
ATTCACCCCTCATAAGCGTGAGGAACATTTTCTCCTCTCTTCATTCTTCTGTTCTCTAGAGAGCAAAGGAAGAGAAGGGAGGATCCTCCGGCTCTGCCATATCACTTACCTGTATGAATGGACACGGCTGAGAGAACAATGAGGGGCTTTCTTTAGTCCCTCCCCCCACTCCCACACACACACACACGCGCACACACAGGCGCGCGCACACACACACACACACACACACACACACACACAAACACACACACACACACACACACACACTTGTTTGAAAGGCGGTGTGATTCTAGAAGAGTTAGAGAACAAACACAATGGCCTCTCTGTTCCTCCATGGTCACCATTTCATGTTCCCTTTACTCATCACTGATGAACTGAGCTGTGACTGATAGGTACTATATTTTAATGAATAATTATGTGCAATATTGAAGAGGAATTCAAAACAAAAAATACAATAATGCATTATAATGCCTCTACCATCTTCATCAACTGTACTGGTGGCATAAGCTATCAGTGGTGATTGTGATTCATTCTAGTGACTTGAATCCTTTGACTCGGTTCACATAGGCCTATACATTTATTCCTTTAGCAGATGAACATTATCAGCCAAACAGATTCGTTTAGATTCTGTTTTACATCAGTAGGTGGCAGAAGTCAGTGTGTCTTTTTGTCTTTTATGAGCTATAGTCACTCAACACATTTCTCCAAAAACAGATTAACGTTTTTTTTTTTTACAAATTACAAAGCACATTTATTTTTTTCCTCCATTTTGTCAATGTCCTTAAATAATTTCACTTGTGATGACAACTGAGACTCAAAACACTTATTTGTTCAGTAAAAGTACAGAATCGGTCAGATTTTCCCAACCACTGCACAAAAAAAAAAAAAAAAAGATTAATTCACTTTAAATATTTCTTCAAAAACAGAACGAAACACCATTACTGAATGTACATCCCCGTGTGACGCATCAAAAAATAGCTTAAATTAAATCTAGCAAATGCGTCACCTACTCAGAATCTATTGTTTGTGTCACAGGTGTCAGTGAATTCTCTCACTGATTCTTACGAGTATTTTGACCTTTAAATGAATCACCAAATGGTGTTCTCTGCCATCTCCACAAGTGTGTTTTTCTCTTTCAACGTTTGAAAATGAGCTGTTTCACTGATTTAACCTTCATGAACCACATAATGTGACAAGAAAGGAAAGAGACAGGAGAAGAGAAAGACTACTGGGAGAAGGAAAGAGAGGTCAGACCCAATTTTAAGAGAAATGGTGTGATTGGGAGCAGAAACATGGACCTTCTTTTAGAGGAGAAAAGAAAGGGCAGAAGGAAGAAAAGAACGAGACATGACTGCATCCGAATATGAAAGAGAAATAGACTGGTTGCATTTGAAAGAATGATTTTACATGAAAGGTAAATCAGGAACGAGAATCATGCCTGGATTCTCCCGTCATAATAATAACCGCAAACACAGCACAGAAACACAGCCGCTCGAAACTTACTCCGACTTGTAGATGTATCAACTGTCCTGGTTTTACAAAGCAAACTGGATTAAGCAACATCCAGCTAAAGTCCACACTAAACAAAAGAAACTGCAGAACAACAACAAAGCTGAGGAAGAGAAATAGGAAAGAAAAAGACATGACCAGAGGAATAATGAGTCAGAGAGAGAGAGGGGGAAGAAGGTCGCTGGAGAGTGACAGACTGAACATCCCAGCAGTAAGACCTGTTAAGTGGACTGAATCCTCAAGATGGAAGAAGTGAGAAACAATGGATAAAGAGGAAGAGAGGGACTGGTGTTACTGTATCTGGTCTGGAATGAGGCTGCACAAAAAACGAGGCCATTTCTGGTTGGCTATGATCCAGTCCGGCTTCCATCATGCCATGGACTGGCACGACATTCTGCGGACCAGGTGCAAGCCACTCAGGAAGAGGAGGAGAGGAAAAGACAGTGAAAGACAAGGGCAAACAGGCGCTTACGCCATTGCTAACTACAACTGAGTGCAGGGATTAAGAGTGTGAAAGGGAAAAAAGGGCGGTGGGGATATAAGAGAAAGCAAAGAGTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_04300720_04301736.mRNA True 2073 mRNA 0.41 2 4300649 4303507

Neighbor

gene id symbol gene type direction distance location
CI01000016_04277441_04297655 NA coding downstream 2432 4276958 ~ 4298217 (-)
CI01000016_04264738_04270463 ABHD16A coding downstream 28478 4263929 ~ 4272171 (-)
CI01000016_04226585_04232287 NA coding downstream 68362 4226439 ~ 4232287 (-)
CI01000016_04181435_04188590 FLOT1B, FLOT1, FLOT1A coding downstream 112059 4181263 ~ 4188590 (-)
CI01000016_04084854_04101874 PIANP coding downstream 198696 4084724 ~ 4101953 (-)
CI01000016_04333323_04333836 NA coding upstream 29366 4332873 ~ 4333836 (-)
CI01000016_04370577_04377413 NA coding upstream 66535 4370042 ~ 4378117 (-)
CI01000016_04385978_04389107 NA coding upstream 82215 4385722 ~ 4390070 (-)
CI01000016_04422169_04424433 RABAC1 coding upstream 118488 4421995 ~ 4424433 (-)
CI01000016_04636548_04646848 ZNF526 coding upstream 332320 4635827 ~ 4646916 (-)
G96810 NA non-coding downstream 117682 4182501 ~ 4182967 (-)
G96792 NA non-coding downstream 178274 4120516 ~ 4122375 (-)
G96793 NA non-coding downstream 180298 4118297 ~ 4120351 (-)
G96789 NA non-coding downstream 232095 4068353 ~ 4068554 (-)
G96788 NA non-coding downstream 234768 4065535 ~ 4065881 (-)
G96758 NA non-coding upstream 18898 4322405 ~ 4367971 (-)
G96872 NA non-coding upstream 64872 4368379 ~ 4368688 (-)
G96857 NA non-coding upstream 98217 4401724 ~ 4413705 (-)
G96909 NA non-coding upstream 178442 4481949 ~ 4482313 (-)
G96912 NA non-coding upstream 182375 4485882 ~ 4486133 (-)
CI01000016_03921124_03930996 NA other downstream 369598 3920055 ~ 3931162 (-)
CI01000016_03647744_03675574 NA other downstream 635336 3647653 ~ 3675585 (-)
G95070 NA other downstream 1315008 2985260 ~ 2985641 (-)
G94786 NA other downstream 2024374 2270836 ~ 2276275 (-)
CI01000016_04921091_04922518 NA other upstream 609201 4918975 ~ 4922518 (-)
CI01000016_05325805_05330265 COX6B2 other upstream 1022012 5325519 ~ 5332874 (-)
CI01000016_05412782_05415867 NA other upstream 1108752 5412248 ~ 5415906 (-)
G97341 NA other upstream 1855479 6158986 ~ 6159721 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other upstream 4585326 8888833 ~ 8894737 (-)

Expression


Co-expression Network