CI01000016_04333323_04333836


Basic Information

Item Value
gene id CI01000016_04333323_04333836
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 4332873 ~ 4333836 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_04333323_04333836.mRNA
AACTGTGGAACATCGAAACCAGACAACAAGAGACGACGACATCGAAGAGGCGTATCATCCCATATTCAAGACTCCAAACTCTCTGGAAATCTACTTAAACCGTTTCCCATCTCAGAGGATACTTCCTTAATATTCTCAAGGCATCCGTTCCTTCATTACGGAATTCCTGGTGGAGACGTTGAGCTGGAAGGACGTAAACTAAGCTGCGTCGAAACCCCGGCCTATTCGGTGCCAGACGGATCAGAACGCGCCAGACCGGCCCGTGTCAGACCGACCACCCTTTCAAAGGTGAGAACAACTTCTTTCAGCAGCATTGATCCAGATGTGGCACTAATAGGGTCACTGAATCAAGATGGAAGCCCAGGGAAACAAAACTACGGTACCCAATATGCCCTCTGATGCTCGGGAACAGAGAGGGATGCTTATAGACTCAAGGGCAGTTGGTTTGAAAGATGATTTAGAGGGAGAACGAATATATGTGTGTGTGTCCAGTTTAAATCACACCGTGTACGTGTGCGAGACCCTGAGAGACTGGAGGAATAACTCACTGCCCTCGAGTCAGACACCACTTAACACGCTGACTCACTCTCATACACACACATACACTCAAACTACACCCGATAGAAAGCTTCCCCATGTGAATGTGTTTAAACTCAATACAGGTGAAACTAGTACAATCCATACTAGATTACAGATATAAATATGTGATATGTGCTCTCATATAGTTCTGTATGCACAGAGCCGTGGTTGACATGCGCAACATTCGACCTGGATATTCACCTCGCCCCGTCTCCGTATTTACAACATTTAGAAGTATAGACATTTTTTGTCATTTTTAAGAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_04333323_04333836.mRNA True 849 mRNA 0.45 2 4332873 4333836

Neighbor

gene id symbol gene type direction distance location
CI01000016_04300720_04301736 NA coding downstream 29366 4300649 ~ 4303507 (-)
CI01000016_04277441_04297655 NA coding downstream 34656 4276958 ~ 4298217 (-)
CI01000016_04264738_04270463 ABHD16A coding downstream 60702 4263929 ~ 4272171 (-)
CI01000016_04226585_04232287 NA coding downstream 100586 4226439 ~ 4232287 (-)
CI01000016_04181435_04188590 FLOT1B, FLOT1, FLOT1A coding downstream 144283 4181263 ~ 4188590 (-)
CI01000016_04370577_04377413 NA coding upstream 36206 4370042 ~ 4378117 (-)
CI01000016_04385978_04389107 NA coding upstream 51886 4385722 ~ 4390070 (-)
CI01000016_04422169_04424433 RABAC1 coding upstream 88159 4421995 ~ 4424433 (-)
CI01000016_04636548_04646848 ZNF526 coding upstream 301991 4635827 ~ 4646916 (-)
CI01000016_04696937_04698098 NA coding upstream 362849 4696685 ~ 4698618 (-)
G96810 NA non-coding downstream 149906 4182501 ~ 4182967 (-)
G96792 NA non-coding downstream 210498 4120516 ~ 4122375 (-)
G96793 NA non-coding downstream 212522 4118297 ~ 4120351 (-)
G96789 NA non-coding downstream 264319 4068353 ~ 4068554 (-)
G96788 NA non-coding downstream 266992 4065535 ~ 4065881 (-)
G96872 NA non-coding upstream 34543 4368379 ~ 4368688 (-)
G96857 NA non-coding upstream 67888 4401724 ~ 4413705 (-)
G96909 NA non-coding upstream 148113 4481949 ~ 4482313 (-)
G96912 NA non-coding upstream 152046 4485882 ~ 4486133 (-)
G96936 NA non-coding upstream 161576 4495412 ~ 4513049 (-)
CI01000016_03921124_03930996 NA other downstream 401822 3920055 ~ 3931162 (-)
CI01000016_03647744_03675574 NA other downstream 667560 3647653 ~ 3675585 (-)
G95070 NA other downstream 1347232 2985260 ~ 2985641 (-)
G94786 NA other downstream 2056598 2270836 ~ 2276275 (-)
CI01000016_04921091_04922518 NA other upstream 578872 4918975 ~ 4922518 (-)
CI01000016_05325805_05330265 COX6B2 other upstream 991683 5325519 ~ 5332874 (-)
CI01000016_05412782_05415867 NA other upstream 1078423 5412248 ~ 5415906 (-)
G97341 NA other upstream 1825150 6158986 ~ 6159721 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other upstream 4554997 8888833 ~ 8894737 (-)

Expression


Co-expression Network