CI01000016_04370577_04377413



Basic Information


Item Value
gene id CI01000016_04370577_04377413
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 4370042 ~ 4378117 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000016_04370577_04377413.mRNA
ACCTCCACATCTGTTAGTCATGCTATTTATGCTTCACACACACAACGACACATCGATTCACATGCAAAGTTCCAGGCTCAGAAATCATGCTGGCATGTTGAATCAAACAACCAATCAAGCCTGTAGCTAATGCATGTCTAAGGACAGATTTTTCCACAAACATGCATCTGACATCCAAGACAGAGATTCTAATAATTTACTGCAGCATAACACAAAATGTCCGTATAACACAAGATCACGCTTTATGTCATCCTTCTAAGGACAAAGTCGATGCAATGATGGATTGAATTTTTAGTAAATAAATGACAGCTTGTGTGCAAAATTTAATTAAAAATATATATATATACATACACGTCTGCTCTCTTTTACAAAAAACAAAAATATTATTTGGCCAAAACACATAATTCTGTATTATAAAACAAATAATTCTTGGTGCTGGCTTCTTTGTTTCTATTACCAACTTTTTGTAATGTCAAGGACTGTATTTTTTAGTGAAAGGATTCCATTTAATGAATTTGCTTAATAAAATTGTTGAAGTTAAATCATGTTTCCTTAATGTTATTGTAATGTTTGGCTGCAGTAATACACACGACGCAGGAGATTCAGAGAAACAAACAGTATTTAATAATAAATCCAAGGAGGAACTCATAGAATGCCACCATCAAACATAAACAAGACCGAACCAAGAACAGAGGATGTGAACCATGTGCTTAAATATACCGAGATATTCTATATACAGGGAAATAATGAACAACAGGTGTCCTCCTCCGTCTCCTCTTTCGTCTTCTCCTCTAGTCCAGCACAACCTGCCCGCCTTAGGGTCAGAGATTAGCACTGGACTGTGTGGCATTAGTAATACGAGGTGTAATCTGCAATACGATCCTGGAGCCCTGGTTAACTCCAACTGCTGTTCAGTCCTCATCGTTGAATTTCCAAACAAAATTTTCTGTCTGTCTTCTGATGAGGCTGAGAATTGTTGCTGTGGTGATGTCATTGGTTGCCTAGCAACAGCTGTCCCTGGGCAACCCACAACCAGGGCCTCTGCGGGAACATTTTGGATTATTTGGGGATGTCGAGGTTATCAGCGGTATCTTGCAGCAATCTGCCAAGGGTGTTTGTGGATGTGAGAACACCCATGGGGGACTAGGGTGTGAGGGTGTGAGAGCCCCGGGGAGTTTCTACAGCTCTGGACACCTTTCAGTCCTACTGCTGACATGCTCTGTCTTCAGTTACTGCCAGTAAATGAACAAAAAAGCAATGCTAAAGGAGATGATGGAAAATCTTGTTGACACAGCATACAGTATTTCACCACATCCTAACAGCTGACTATGTTATGTTGGCTATGCTAATCAATTCTCCACAAATTCTCTTTGTCTGTTACACTTGTAGTTTATCAGTAACTCTAAATCACATATCATGCCATTATTTTGTTCCTAAGTTGTGCAATATGCTCTTCCTAACACAATTAGAAATGCTCCAACTCTGGAATGTTTCAAGAAGTTGATAAGACTTGTATTTATGTATTATGTATGTATCTAAGGTTAATTTTTTTTACTAACTTGTTTGTTATTTATTTAATTTTAATTGTTGTTGCATGTTTTTCTATTTTATACTTACTGTTGTAGCGTTTTGAGTGCAAAAAAAAAGCACATTACAAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000016_04370577_04377413.mRNA True 1662 mRNA 0.38 5 4370042 4378117

Neighbor


gene id symbol gene type direction distance location
CI01000016_04333323_04333836 NA coding downstream 36206 4332873 ~ 4333836 (-)
CI01000016_04300720_04301736 NA coding downstream 66535 4300649 ~ 4303507 (-)
CI01000016_04277441_04297655 NA coding downstream 71825 4276958 ~ 4298217 (-)
CI01000016_04264738_04270463 ABHD16A coding downstream 97871 4263929 ~ 4272171 (-)
CI01000016_04226585_04232287 NA coding downstream 137755 4226439 ~ 4232287 (-)
CI01000016_04385978_04389107 NA coding upstream 7605 4385722 ~ 4390070 (-)
CI01000016_04422169_04424433 RABAC1 coding upstream 43878 4421995 ~ 4424433 (-)
CI01000016_04636548_04646848 ZNF526 coding upstream 257710 4635827 ~ 4646916 (-)
CI01000016_04696937_04698098 NA coding upstream 318568 4696685 ~ 4698618 (-)
CI01000016_04802496_04812976 NA coding upstream 424337 4802454 ~ 4813266 (-)
G96872 NA non-coding downstream 1354 4368379 ~ 4368688 (-)
G96758 NA non-coding downstream 2071 4322405 ~ 4367971 (-)
G96810 NA non-coding downstream 187075 4182501 ~ 4182967 (-)
G96792 NA non-coding downstream 247667 4120516 ~ 4122375 (-)
G96793 NA non-coding downstream 249691 4118297 ~ 4120351 (-)
G96857 NA non-coding upstream 23607 4401724 ~ 4413705 (-)
G96909 NA non-coding upstream 103832 4481949 ~ 4482313 (-)
G96912 NA non-coding upstream 107765 4485882 ~ 4486133 (-)
G96936 NA non-coding upstream 117295 4495412 ~ 4513049 (-)
G96943 NA non-coding upstream 143093 4521210 ~ 4521422 (-)
CI01000016_03921124_03930996 NA other downstream 438991 3920055 ~ 3931162 (-)
CI01000016_03647744_03675574 NA other downstream 704729 3647653 ~ 3675585 (-)
G95070 NA other downstream 1384401 2985260 ~ 2985641 (-)
G94786 NA other downstream 2093767 2270836 ~ 2276275 (-)
CI01000016_04921091_04922518 NA other upstream 534591 4918975 ~ 4922518 (-)
CI01000016_05325805_05330265 COX6B2 other upstream 947402 5325519 ~ 5332874 (-)
CI01000016_05412782_05415867 NA other upstream 1034142 5412248 ~ 5415906 (-)
G97341 NA other upstream 1780869 6158986 ~ 6159721 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other upstream 4510716 8888833 ~ 8894737 (-)

Expression



Co-expression Network