CI01000016_04507602_04509233


Basic Information

Item Value
gene id CI01000016_04507602_04509233
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 4506935 ~ 4509233 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_04507602_04509233.mRNA
GTATAAAGGAACTTTGAGAGACTCACTATGACAAAAAAATACAAGCATACCAAAATCTCAAATACCAAAAACAAACACCAAAAAATACGGATGGAAAAGCTTTATCCAAAGGACATGTAAATAGCCAACCATCCAGGACCAGACCCAGTGACAACAATCCAGCCATCTCTGAGCTCATCATCTCATTTGCCTTGCAATCATACCGTTTTCTTTCACGGTTTCTATGATTCACTGTTTCAGCGTAAAATATAAGCGAGCCAGGCTCAAACGCTCGTGTTTCACTTGTTCTGCCTCATTCTTGTTTATGTTTTTCACAGAAGTAGCAGATTTTCCATCAGCCTTCATTAAATGTTTCCATACATGTGATCATCAGCATCATCGTTTCATGTCTTATTGAGCATATAGAGAGGATTGGGTGTTTGGTCTTTGATGTGTTCATCATATTAGCGCTGCATAGCTTGATCCACTTGTTTGTCCAATGACATGAATGTCGTAAAGTGTAATAAAAGTGAGACCAAGGTCCTCCTCTGTAGCTTTTACTGCTCAAAGTGTAAATACTCTCATTTCTCTCTTAATAATTAAGTGCTTGCATGACTCCCTCACTCACTTTCTCCCTTTTGAATACCAAAGCGATTCATTCATACATGATCAGTTCATCATTCACACAATGCAGAAAGAGTCTGGGGGCCCAAACCTTGACAAGGCCGCTCTGGTAAGGCAGCATGGCAACATGGGAAAGGGCTCCTATCCTCTCTGCTTCTTCTACAAGCCAAAAAATGAAGCGAAACTTCACAGCCAGCCGAACTTCCCAGAAAGGAAAACCAAAAACAAATCAAGCCAAAAATTGATGGACGTTGAGCGCAGTGCTGCCGTGAGCCTTGACCTGAAAGCTTTAAACAGCTACAAAACCAAAAACTTTAGGAGAGAAAAGATGGAGGCATTTGGGGTTCCTGGAGGGAAAATACAGCAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_04507602_04509233.mRNA True 973 mRNA 0.41 2 4506935 4509233

Neighbor

gene id symbol gene type direction distance location
CI01000016_04491680_04506535 POU2F2A coding upstream 129 4491376 ~ 4506806 (+)
CI01000016_04428669_04441464 DEDD1 coding upstream 65471 4428669 ~ 4441464 (+)
CI01000016_04400456_04412173 ATP1A3A, ATP1A3B, ATP1A3 coding upstream 93863 4400456 ~ 4413072 (+)
CI01000016_04365155_04367358 NA coding upstream 138988 4364285 ~ 4367947 (+)
CI01000016_04321053_04331396 NA coding upstream 174696 4321053 ~ 4332239 (+)
CI01000016_04557546_04579200 NA coding downstream 48313 4557546 ~ 4579501 (+)
CI01000016_04590667_04633139 CIC, CICB coding downstream 81434 4590667 ~ 4634450 (+)
CI01000016_04649660_04661928 GSK3A, GSK3A.S, GSK3AA, GSK3AB coding downstream 140345 4649578 ~ 4663555 (+)
CI01000016_04666701_04684512 NA coding downstream 156689 4665922 ~ 4684837 (+)
CI01000016_04743905_04763216 GRIK5 coding downstream 234588 4743821 ~ 4763507 (+)
G95659 NA non-coding upstream 88321 4417888 ~ 4418614 (+)
G95650 NA non-coding upstream 133715 4372986 ~ 4373220 (+)
G95649 NA non-coding upstream 135102 4371581 ~ 4371833 (+)
G95445 NA non-coding upstream 324994 4077383 ~ 4181941 (+)
G95673 NA non-coding downstream 7643 4516876 ~ 4517094 (+)
G95485 NA non-coding downstream 28447 4537680 ~ 4546072 (+)
G95489 NA non-coding downstream 38280 4547513 ~ 4554010 (+)
G95692 NA non-coding downstream 304948 4814181 ~ 4927792 (+)
G95703 NA non-coding downstream 342808 4852041 ~ 4852964 (+)
G95648 NA other upstream 233030 4272636 ~ 4273905 (+)
G95439 NA other upstream 643078 3862175 ~ 3862305 (+)
G93406 NA other upstream 3579403 905400 ~ 927532 (+)
CI01000016_04829592_04837305 NA other downstream 325325 4829592 ~ 4837457 (+)
G95792 NA other downstream 710647 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 896636 5405791 ~ 5407963 (+)
G96389 NA other downstream 2651408 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 3274832 7783987 ~ 7784996 (+)

Expression


Co-expression Network