XLOC_007911 (nek12)


Basic Information

Item Value
gene id XLOC_007911
gene name nek12
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 28426602 ~ 28432699 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00015434
ACGATCAGTTTTCGGTTATTCTAAACTGAAGATCATTTCTCTTTGACTGTGATGATGACTCgaatattaaacaaaacatgcAGAGCTTTGAGAACAGAGATTTCTTATTGTAAGCTACAAAAACAGCCAGACTATTGCTGATCCCCACAGATGAGTGGTGATAATCATATCCAGCTTATCAAGACTAAAGAAATGTTCCTGCAACCAGCAAAGGCATAAAGAAGATGCTTGGTGAACTGATATCATCAAGATATGGAGAAATATGATAAAGTCCTGACTCTTGGCCAAGGAGGAGCAGGCGTTGTGTCACTGATGAAACATGTTGACACAAAGAAGTTATGTGCAGTCAAGAGAATACACGTGGACAGTTCCAGAAAAACAAAGACCAAAGACGTTGTGTTGCAAGAGGCGATAGTTCTTCGCAGCTTGAAGCATCCTCATATTATAACATGGATTGACACGTTCTTTGACGCAACTAATGAAAGTATTTACATCGTCATGGATTATTGTGATGGTGGAACACTAGATGACCACATTAAAGAGCAGAAATGTGGAGAACACTTTACAGAATCCAACATCATGGACTGGTTTGTGCAAGTGGTCATGGCTGTCAGTTACATCCACTCTGAAAAGATCCTTCACAGAGATATCAAACCTTCCAATGTGCTGTTAACCAAAAGAGGCGTGATCAAGCTTGGGGATTTCGGAATATCAAAGATTATGAATCACACACTTGATATGGCCTCCACTTGTGTTGGAACCCCCAGTTATTTGAGTCCCGAACTCTGTCAGGATGTCCCATACAGCACCAAATCTGACATATGGGCCGTTGGCTGCCTACTATATGAGCTCTGTGCACTCAAACCAGCGTTTCAAGCCAAAAATCTCCTAAGTCTCTTTTACAAGATCATAAAAGGGGAGTACATCAAAGTCCCTGAGATGTACTCAGAAGACATCCATACATTAATCGAGAAAATGCTGTCCTTGATTCCTGAGAACAGACCAAGCGCAGCTAGCATACTTAGCATGACCTATGTGCAAGAACATCTGGGAAACTTCATCACAAATCAGGAAAAAGAACTTACGAAGGTGAATGCTGAATCCAGACCTCAAACTAAAGAAGACTTTACTGTAGATATGGAAAGCAGAACAGATTGTGCCTCAGCTGTCTTTGATAAGACACTGGAAATAGAGATGTCAGGCATTGCTGAGGAGGAAGTGGCCCATGAAGGAACAGAGTCGGATTATTCAGAGGACTTTGACGAACACGATAGCTATGCATCCTCCGAGGATGTTTCGAGAGAAGATGGCTCCTCCAGCCTTGCCAATGTGGCTGAAGAGGCATTTGAGGAATCTAGTGCTGTATTTGAAGACGAGGAGATTTCTGACTACCCGGATGACTTTGAAGAAGCTGAAGATGATGACCTGGCAGAAGTGGTCAGCTACGCCAGAGATGTCATTAACTCTTCATCTGAGAATGATGTGTTTGATGTGGAGCTGGAGCTTAAAGATGCAGATGGTTTCTCTGTCACCATGAAAATGTTAAAGGAGAAATACATGgAGGATGTTGGAGCCTCAGTCTATGAGGAAATCAGTGAGCACTTTTTGAATGGCCTCACACCAGAAGACCTGCAGCCACAGTTTCAGCACATGATCGGTACTGACCATCTGGAGACCTGCTATCTCATATTCAACCTTGACCAGGAAACCACATGCTGAATCATGCTGTTCCAATTTAGGTAAAGACTCATGAATTGTGAAACATTGTTCTCCTTTTGTGATGTGAACAATTTGACTTTTTCATCAAGCACTCAGTACTCCGAAATCGTTACCTCATATGACCAGTAGGTGGCACTATATAGTAAGAAAATGTGTAACAAACCAATCCAGAAAATGAAAA
>TCONS_00015435
ATGGAGAAATATGATAAAGTCCTGACTCTTGGCCAAGGAGGAGCAGGCGTTGTGTCACTGATGAAACATGTTGACACAAAGAAGTTATGTGCAGTCAAGAGAATACACGTGGACAGTTCCAGAAAAACAAAGACCAAAGACGTTGTGTTGCAAGAGGCGATAGTTCTTCGCAGCTTGAAGCATCCTCATATTATAACATGGATTGACACGTTCTTTGACGCAACTAATGAAAGTATTTACATCGTCATGGATTATTGTGATGGTGGAACACTAGATGACCACATTAAAGAGCAGAAATGTGGAGAACACTTTACAGAATCCAACATCATGGACTGGTTTGTGCAAGTGGTCATGGCTGTCAGTTACATCCACTCTGAAAAGATCCTTCACAGAGATATCAAACCTTCCAATGTGCTGTTAACCAAAAGAGGCGTGATCAAGCTTGGGGATTTCGGAATATCAAAGATTATGAATCACACACTTGATATGGCCTCCACTTGTGTTGGAACCCCCAGTTATTTGAGTCCCGAACTCTGTCAGGATGTCCCATACAGCACCAAATCTGACATATGGGCCGTTGGCTGCCTACTATATGAGCTCTGTGCACTCAAACCAGCGTTTCAAGCCAAAAATCTCCTAAGTCTCTTTTACAAGATCATAAAAGGGGAGTACATCAAAGTCCCTGAGATGTACTCAGAAGACATCCATACATTAATCGAGAAAATGCTGTCCTTGATTCCTGAGAACAGACCAAGCGCAGCTAGCATACTTAGCATGACCTATGTGCAAGAACATCTGGGAAACTTCATCACAAATCAGGAAAAAGAACTTACGAAGGTGAATGCTGAATCCAGACCTCAAACTAAAGAAGACTTTACTGTAGATATGGAAAGCAGAACAGATTGTGCCTCAGCTGTCTTTGATAAGACACTGGAAATAGAGATGTCAGGCATTGCTGAGGAGGAAGTGGCCCATGAAGGAACAGAGTCGGATTATTCAGAGGACTTTGACGAACACGATAGCTATGCATCCTCCGAGGATGTTTCGAGAGAAGATGGCTCCTCCAGCCTTGCCAATGTGGCTGAAGAGGCATTTGAGGAATCTAGTGCTGTATTTGAAGACGAGGAGATTTCTGACTACCCGGATGACTTTGAAGAAGCTGAAGATGATGACCTGGCAGAAGTGGTCAGCTACGCCAGAGATGTCATTAACTCTTCATCTGAGAATGATGTGTTTGATGTGGAGCTGGAGCTTAAAGATGCAGATGGTTTCTCTGTCACCATGAAAATGTTAAAGGAGAAATACATGgAGGATGTTGGAGCCTCAGTCTATGAGGAAATCAGTGAGCACTTTTTGAATGGCCTCACACCAGAAGACCTGCAGCCACAGTTTCAGCACATGATCGGTACTGACCATCTGGAGACCTGCTATCTCATATTCAACCTTGACCAGGAAACCACATGCTGAATC

Function

symbol description
nek12 Predicted to enable ATP binding activity and protein kinase activity. Predicted to act upstream of or within protein phosphorylation.

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050410-11 Predicted to enable ATP binding activity and protein kinase activity. Predicted to act upstream of or within protein phosphorylation.

Ensembl:

ensembl_id ENSDARG00000037174

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00015434 False 1900 mRNA 0.42 4 28426602 28432699
TCONS_00015435 True 1470 mRNA 0.44 3 28426780 28430505

Neighbor

gene id symbol gene type direction distance location
XLOC_007910 CU019650.1 coding downstream 298324 28128158 ~ 28128278 (-)
XLOC_007909 tsc22d3 coding downstream 374051 27998756 ~ 28052551 (-)
XLOC_007908 NA coding downstream 421339 27987463 ~ 28005263 (-)
XLOC_007907 NA coding downstream 712565 27698025 ~ 27714037 (-)
XLOC_007906 CR854833.1 coding downstream 869980 27556486 ~ 27556622 (-)
XLOC_007912 nxt2 coding upstream 26740 28459439 ~ 28473639 (-)
XLOC_007913 zgc:113364 coding upstream 97454 28530153 ~ 28534563 (-)
XLOC_007914 insb coding upstream 130382 28563081 ~ 28568152 (-)
XLOC_007915 NA coding upstream 144774 28577473 ~ 28580808 (-)
XLOC_007916 NA coding upstream 161486 28594185 ~ 28596730 (-)
XLOC_007641 CU855896.1 misc downstream 26018762 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 26019171 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 26019530 2406945 ~ 2407072 (-)
XLOC_007905 NA non-coding downstream 1087163 27322219 ~ 27339439 (-)
XLOC_007917 NA non-coding upstream 479210 28911909 ~ 28915186 (-)
XLOC_007918 CABZ01048945.1 non-coding upstream 920308 29353007 ~ 29353123 (-)
XLOC_007919 NA non-coding upstream 1268621 29701320 ~ 29701634 (-)

Expression


Co-expression Network