CI01000016_04981918_04985412


Basic Information

Item Value
gene id CI01000016_04981918_04985412
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 4981610 ~ 4985635 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_04981918_04985412.mRNA
ACTTAAAAAACCCCCAACATATCTGTATGAATTAGCATACAGCAGCTCAATGTCAAAGCAGGTTTCGGTTTATTTTTTGTATGTGCGCGCGTACTCATCTTATCAGTTTTACAGCAGTCAGCTGTCCCACCCACTGTTTTTCTTTCCATTTTGCTATTGTTGCCACATCATGTGAAACCCCAGCATGTGATGTTTGCACATTTAACACTCGCCAGGGTTCACAACTCGACTCATAAGTAGCTGCTATCAGACATTAATCAACAGTTTGTCATTGATTCTTGGTACGTCTGTTTTTATTTTAGTCAAACATGCAGGTAGAACTGGACGGACTGTTTAAGGATAACAAAACCTTCGACTATGACGATTATGTATACAAGGATGAGGTATGCCCGTCCAGCACGGTCTCTGGTTCCTTGGCGATCTTCATTCCCCTGCTTTACTCTGTGGGGTTCTTATGGGGGCTGCTGGGAAATGGACTGGTGCTGACAATACTGTGGCGTAAGAGGCCGAAGCTGAGTGTGATGGACATCTTCATCCTTAATTTGAGTGTAACGGACAGCCTGCTGTTGCTCACACTGCCTCTCTGGGCTGCAGACGCGGTTAAGGGATGGTTCATGGGCACAGGGCTCTGCAAACTGGCTGGAGCTATGTTTAAGATCAATTTCTACTGTGGTATCTTCACGTTGGCCTGCATGAGTGTTGACTGCTACCTGTCCATCGTCCGAGGAGTACGGATGTTTTCCTGTAAAAAACGTGTGGTGGTTTACTGTTCCTGCCTGATTATCCTGATCATTTGCCTGCTCCTTTCCATCCCTGATTGGATCTATCTGAGGCCCATCAGAGCAAGTCGGGATACAGCGGAATGTTATTATCCACCTAATACCTGCCGTCTTGCCTCTCGTCTTTCACATATTGTGTGCTTTGTTCTACCAGCACTTGTGCTGCTGTTCTGTTGTTCCTCTGTCCTGCTGAAATTATGGCACAACTCCAAGTGCCAGCAGAAGAAGAAGGGCCGAAGTACAGCTGTCATTGCAGCCCTTGTGCTGGCTTTCTTCATCTGCTGGACACCCTACAACATTACCTTCATCGTGGACACGGCTCAGCCAGTGGACAGCATCTCCTCAGCAGGGGCAGACGACTGTGAAGGGAGGCAGTGGAGAGCTAGCAAAATAACAGCCATTTTTGGACTTCTCCATTGCATCGTTAATCCTGTTATTTACCTCTGTCTCTCCAAAGAGTTCCGGCGACGCGCACTGACTATGATAAAGTTCAGTGCTTGTGAAACAGACAGTAATGATATTTCGCTTTGGGACTCTAGTGAAGGAAACAGGAATGCTTCTGTCCAAGAGGAACAAGGTTCACTTCAACCTATGAATGACATTAACCAACAATAAAAACCCAGGATTATGATACTTGAAATCATAAAACATTGAATCTCATAATTCCGTAAATGTATTTTATGAATACTTTATTTAACATAAGCATTACATTTGTTGACATATTACTAGTTATGGAATAACCCAATGTTGGATGATAAATTAGCATCCTCCAAAGGGTTTTGTACATGCATTCTGCAAATAGATGATAAAGGAAACATTATGCTTTTATTAAGAAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_04981918_04985412.mRNA True 1617 mRNA 0.44 2 4981610 4985635

Neighbor

gene id symbol gene type direction distance location
CI01000016_04969263_04970446 CXCR3.2 coding upstream 10978 4968502 ~ 4970632 (+)
CI01000016_04932388_04935392 NA coding upstream 45706 4931929 ~ 4935904 (+)
CI01000016_04911596_04920356 NA coding upstream 60791 4910169 ~ 4920819 (+)
CI01000016_04893170_04904103 NA coding upstream 77351 4893133 ~ 4904259 (+)
CI01000016_04850826_04860560 NA coding upstream 120925 4850315 ~ 4860685 (+)
CI01000016_05064542_05068162 NA coding downstream 77279 5062914 ~ 5068810 (+)
CI01000016_05100744_05111181 P3H3 coding downstream 115109 5100744 ~ 5111389 (+)
CI01000016_05117302_05122058 GNB3A, GNB3 coding downstream 129791 5115426 ~ 5122712 (+)
CI01000016_05192890_05204267 TPI1.S, TPI1, TPI, TPI1B, TPI1A coding downstream 207147 5192782 ~ 5204759 (+)
CI01000016_05229439_05231984 NA coding downstream 243704 5229339 ~ 5233159 (+)
G95751 NA non-coding upstream 1297 4980101 ~ 4980313 (+)
G95718 NA non-coding upstream 19024 4962250 ~ 4962586 (+)
G95692 NA non-coding upstream 53818 4814181 ~ 4927792 (+)
G95703 NA non-coding upstream 128646 4852041 ~ 4852964 (+)
G95726 NA non-coding downstream 71361 5056996 ~ 5088557 (+)
G95731 NA non-coding downstream 74536 5060171 ~ 5091009 (+)
G95785 NA non-coding downstream 138589 5124224 ~ 5127893 (+)
G95737 NA non-coding downstream 218252 5203887 ~ 5206127 (+)
G95793 NA non-coding downstream 247561 5233196 ~ 5325915 (+)
CI01000016_04829592_04837305 NA other upstream 144955 4829592 ~ 4837457 (+)
G95648 NA other upstream 707705 4272636 ~ 4273905 (+)
G95439 NA other upstream 1117753 3862175 ~ 3862305 (+)
G93406 NA other upstream 4054078 905400 ~ 927532 (+)
G95792 NA other downstream 234245 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 420234 5405791 ~ 5407963 (+)
G96389 NA other downstream 2175006 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 2798430 7783987 ~ 7784996 (+)
G97824 NA other downstream 3028728 8014363 ~ 8015775 (+)

Expression


Co-expression Network