Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000016_05052905_05056425 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000016 |
| NCBI id | null |
| chromosome length | 12175457 |
| location | 5052375 ~ 5056425 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| CD4-like 2a*01 protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000016_05052905_05056425.mRNA | True | 1636 | mRNA | 0.45 | 7 | 5052375 | 5056425 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000016_05037135_05040030 | NA | coding | downstream | 11011 | 5037135 ~ 5041364 (-) |
| CI01000016_05011639_05013290 | NA | coding | downstream | 39085 | 5009773 ~ 5013290 (-) |
| CI01000016_04995532_04996727 | NA | coding | downstream | 55648 | 4994812 ~ 4996727 (-) |
| CI01000016_04971399_04981029 | NA | coding | downstream | 70975 | 4971342 ~ 4981400 (-) |
| CI01000016_04936283_04939240 | TLR21 | coding | downstream | 113135 | 4936013 ~ 4939240 (-) |
| CI01000016_05057407_05062686 | NA | coding | upstream | 801 | 5057226 ~ 5062770 (-) |
| CI01000016_05086983_05098757 | UBP5, USP5 | coding | upstream | 30388 | 5086813 ~ 5098757 (-) |
| CI01000016_05124385_05128589 | CDCA3 | coding | upstream | 67834 | 5124259 ~ 5128975 (-) |
| CI01000016_05131457_05146340 | PEX5 | coding | upstream | 74323 | 5130748 ~ 5146340 (-) |
| CI01000016_05151082_05166013 | CLSTN3 | coding | upstream | 94632 | 5151057 ~ 5166013 (-) |
| G97037 | NA | non-coding | downstream | 81595 | 4969389 ~ 4970780 (-) |
| G97101 | NA | non-coding | downstream | 85073 | 4967002 ~ 4967302 (-) |
| G97100 | NA | non-coding | downstream | 86069 | 4966094 ~ 4966306 (-) |
| G97098 | NA | non-coding | downstream | 87744 | 4964408 ~ 4964631 (-) |
| G97097 | NA | non-coding | downstream | 88731 | 4962586 ~ 4963644 (-) |
| G97045 | NA | non-coding | upstream | 11259 | 5067684 ~ 5073528 (-) |
| G97135 | NA | non-coding | upstream | 66655 | 5123080 ~ 5123476 (-) |
| G97139 | NA | non-coding | upstream | 134601 | 5191026 ~ 5191428 (-) |
| G97012 | NA | non-coding | upstream | 136367 | 5192792 ~ 5204813 (-) |
| G97148 | NA | non-coding | upstream | 284614 | 5341039 ~ 5341800 (-) |
| CI01000016_04921091_04922518 | NA | other | downstream | 128971 | 4918975 ~ 4922518 (-) |
| CI01000016_03921124_03930996 | NA | other | downstream | 1121324 | 3920055 ~ 3931162 (-) |
| CI01000016_03647744_03675574 | NA | other | downstream | 1387062 | 3647653 ~ 3675585 (-) |
| G95070 | NA | other | downstream | 2066734 | 2985260 ~ 2985641 (-) |
| G94786 | NA | other | downstream | 2776100 | 2270836 ~ 2276275 (-) |
| CI01000016_05325805_05330265 | COX6B2 | other | upstream | 269094 | 5325519 ~ 5332874 (-) |
| CI01000016_05412782_05415867 | NA | other | upstream | 355834 | 5412248 ~ 5415906 (-) |
| G97341 | NA | other | upstream | 1102561 | 6158986 ~ 6159721 (-) |
| CI01000016_08893013_08893496 | NPPCL, ANFC1 | other | upstream | 3832408 | 8888833 ~ 8894737 (-) |
| CI01000016_08926089_08945071 | NA | other | upstream | 3880364 | 8925960 ~ 8945229 (-) |
