CI01000016_05412782_05415867


Basic Information

Item Value
gene id CI01000016_05412782_05415867
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 5412248 ~ 5415906 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_05412782_05415867.mRNA
ATGGGCAGCTATCCAGTCTCTGTGCTGCTATGCTGTTGTTTCTTTGAAATACAGGACACTGATGTCACTGCTTTGCAGCCACCAGACTGCAGAGAGGAAACATACCCCTGCACCAGGATGTACTCTGTTCATCGGCCGATAAAGAGATGTATCCATTCGCTCTGTCTCTACAGCCTTCCAAGAGTCTATGTGATAAACAAGGAGATCTGTGTGAGGACCGTGTGCCAGCAAGACGAAATCCTGCTGGGTAAATCACTCAGTAACAAACTACAAAACTTTCCACTCATGTCAATTTGAACTTATGATTTTTGAATTATTTATATTGTTATAATATATTATTTTCTCTCTCTCTCTTTTCAGCTGAACTCTGTAGAGAGAAATCTGGGTGGCCAAAACGCCAAAAGAGGACAACTAGGAAACGCTGTCGCCGTGGCAACCCAAAAACCTGGGCAAACAAGGCCTAAAGTCAGATGGATTACAAAGTCAGCGAGATAAAGAAGAGAGTTCTGGGACCAACATCTTTAAACCTGTTGCACTCCTAAAAGCAAACCGAAGCGGTCACAATCATTACTGTTCATTATCACTTTTTTTTTTATCATTTTAATGCTTGTGCTTGGAACTGAAATAAGCTTGGTTGAATGCCTCAGTGTTTTTGTTTTAAGACTGTACTTTAATAGGATCACAAAGGGCATGACAATGCACAGCTTTGGTGCTGAATGTTAAAGTAGCCCACTGTATAACCACTATATGTGCTTTATATTCTTCTAGTATACTGTATATGTCCACACCAACCACTGTAAGTAAAAGACAACATCCACAATAGCAAATAAA

Function

NR:

description
Microfibrillar-associated protein 2 precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_05412782_05415867.mRNA False 831 mRNA 0.40 4 5412248 5415867

Neighbor

gene id symbol gene type direction distance location
CI01000016_05374626_05378364 NA coding downstream 33575 5373845 ~ 5386465 (-)
CI01000016_05325805_05330265 COX6B2 coding downstream 79374 5325519 ~ 5332874 (-)
CI01000016_05313099_05322439 SLC2A3B coding downstream 89301 5312803 ~ 5322947 (-)
CI01000016_05249001_05286683 EPHB6 coding downstream 125565 5247560 ~ 5286683 (-)
CI01000016_05233964_05243756 NA coding downstream 167880 5233656 ~ 5244368 (-)
CI01000016_05426889_05429942 NA coding upstream 9909 5425776 ~ 5429942 (-)
CI01000016_05461674_05464777 FOXJ2 coding upstream 45807 5461674 ~ 5464777 (-)
CI01000016_05468882_05473383 ISOC2 coding upstream 52896 5468763 ~ 5473383 (-)
CI01000016_05508930_05523828 CACNG8B coding upstream 92220 5508087 ~ 5523828 (-)
CI01000016_05547222_05557502 CACNG7 coding upstream 131172 5547039 ~ 5557502 (-)
G97165 NA non-coding downstream 328 5411655 ~ 5411920 (-)
G97160 NA non-coding downstream 9879 5402143 ~ 5402369 (-)
G97148 NA non-coding downstream 70448 5341039 ~ 5341800 (-)
G97012 NA non-coding downstream 207435 5192792 ~ 5204813 (-)
G97180 NA non-coding upstream 137428 5553295 ~ 5553986 (-)
G97203 NA non-coding upstream 149330 5565197 ~ 5566153 (-)
G97215 NA non-coding upstream 150426 5566293 ~ 5573569 (-)
G97252 NA non-coding upstream 361537 5777404 ~ 5777668 (-)
G97255 NA non-coding upstream 418703 5834570 ~ 5834911 (-)
CI01000016_04921091_04922518 NA other downstream 488844 4918975 ~ 4922518 (-)
CI01000016_03921124_03930996 NA other downstream 1481197 3920055 ~ 3931162 (-)
CI01000016_03647744_03675574 NA other downstream 1746935 3647653 ~ 3675585 (-)
G95070 NA other downstream 2426607 2985260 ~ 2985641 (-)
G97341 NA other upstream 743119 6158986 ~ 6159721 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other upstream 3472966 8888833 ~ 8894737 (-)
CI01000016_08926089_08945071 NA other upstream 3520922 8925960 ~ 8945229 (-)
G98679 NA other upstream 3819129 9234996 ~ 9239929 (-)
G98691 NA other upstream 3840235 9256102 ~ 9257611 (-)

Expression


Co-expression Network