CI01000016_05445824_05454816 (EPN1)


Basic Information

Item Value
gene id CI01000016_05445824_05454816
gene name EPN1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 5445824 ~ 5455416 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_05445824_05454816.mRNA
GTTAGGGAAGCAACCTCTAATGACCCATGGGGTCCCTCTAGCTCTCTGATGTCAGAGATTGCTGATCTGACATACAATGTAGTGGCCTTCTCAGAGATTATGAGCATGGTCTGGAAAAGACTCAATGACCATGGGAAGAACTGGAGACATGTATATAAAGCTATGACTCTGATGGAGTATCTGATAAAGACAGGATCAGAGCGAGTTGCACAGCAATGCAGGGAAAACATCTACGCCGTTCAGACACTCAAAGACTTCCAATACATAGACAGAGATGGCAAGGACCAGGTCTCCATGTGCAGTCAACTCAAACACCATGACTTTCAACCAAGGTCTTTCTCCCACTCACACTTAAACCACAAAAACATCAGCCCAGTCTTCAACCAACTAGGTTTTATTTTAGTCACCCTGGGTGTGAATGTACGGGAAAAGGCCAAGCAGCTGGTGACTCTGCTAAAAGATGAGGAGAGGCTACGAGAGGAGAGAATCCATGCACTCAAGACCAAAGAGAAGATGGCACAGACCAGCAGTGGGGGAGGAGTGCACTCAGGAGCAGACGCTGAGCAGGCGTGGCCCCAGAGCTCCGGAGAGGAGGATCTGCAGCTCCAGCTGGCACTGGCCATGAGCAAGGAGGAGGCAGAGCAGACTAGCAAAGACCCTCTGGAAGATGCAGAGATCCGCTACGCACTCACACTCAGCCAGGAGACTCACCAAAAGAACTTGGTTCACTATGATGATGTGACGGTGGTGTGTGATTGGCAGGAGGAGCGTCTGCGCAGGGGAGACGACCTGAGGCTGCAGATGGCCATCGAGGAGAGTAAGAGGGAGAAAGCCAAGCCCGAGGAGTCGTCTCTGATGGAGTTGAGTGTCGTAGATCCTTGGGGGGCCCCTGCGTCGGGCTCTGCGGGACCCTCTCCTCCTCCAACTTTGGCTCCTGCATCTACCGCTGGGCCTTGGGGCCCGGCTGACCCGTGGGGAGCCGCCTCCCCCGCCTCTCCCCCGAGTGCCGATCCCTGGGGAGCAGCACCAGCAACAGTAGCCCCAGACCCATGGGGTGACTCATCTTCTAGAGTGAACTCTGATCCCTGGGCGTCCACAGCTGTGACCCCTCCAAGTGCCGACCCTTGGGCTCCCTCAGTGGCTCCGGCTCCTACCTCGCTCTCAGGGTCAACCGATCCCTGGGCAGCGGAAGGAGTCGCCCCTGCCACTGACGGTCTGACCTCTGACCCCTGGAGTGGCTCGGTTAAACAAACTAATGGCACAGCAGATCTAGAGAGAAGAGGATCATCAGTGATAGGAGGTGATGCAGGAGGTGGAGGCAGCACAGGCTCACCGGTGCCCTTTGACCTTTCATCGCTCGGTTCCTCCTTGCCTGTTCGAAAAACGCCAGAGTCATTCTTGGGGCCCAATGCAGCACTCGTGGATTTGGACTCACTAGTATCATCAAAACCCAAACCTAAACAACCTCCACCGCCAAGTATCTCCTCAACATCTCACAACCCCTTCCTACAGACACAGGGTCCCTCCTCAACAGGTATGGGAGTTACCCCAGGCAGTACCATTTCCAGTAGAGGGGTGTCTCCGACCCCACCTTCCGCTTCTAATCCTTTTGGCGCGACCCCGATGGCATCCATCTCCCCTCAACCTTCTTCACTTGGTCTGAGCCAGCTCCGTACAAGCCCTGTTCCCCCAAATCCTATGCTGGGTCATATGCCTCCACCAGCAGTGGGAATGGTTCAGCCAGGGATGGCCATGCCAGGAATGGGGGTCCCTATGGCGGCCCCTGGTATGGGCATGGGAATAGTACAGTCCAGCCCAATGGGCATGCCTTTTGGTGGAATATCCCCCATGGGTCCCGCAGGAAACCCCTTGCTGATGGGCCCAGGAGGCCCTGCGCAGCCTGCACTGATTTTGGGCGGGCCGTCTGGGGTGGGCGGCGTAATGGGAACAGGAGGATCCATGGGAGGTGGAACCACAGGCACAAGCACCAATCCTTTCCTTCTTTGAGAGATTTCACCAATCCCATATTGCCCTATCCACTCAACAACCAATCCAAACCTGCCCTACCAACACAAACAGTTTGTGTTTGACAAAAAAGAAATGTGTGTACATCTCTATATTTAATGAAAAAGTAAAACAAAAACGTGTTATTTTCTTTCACAAAACAGCATTTCAATATTTTTTTTTTTTCATTTTATTTTACACAGTATTTGGAGTCTATTTATTTCCCTTTTGGTTCAGTTTTTTTTCTTTCTTTGACAGACATGGATGATTGGCGGGTTCATTCAATGAATGCAGGTTGTTAATATTGTTATATTATTAGGATGATTGTTCTTGCTCAGTAACAGGAAGATGAAGATATGGGAGGAGGAAAACAAGCCACTAATGAACTCAATCATACACCCCTTTCTCCTTCTTTCATTGATGAGGTGAACCTCTGATGAAAGAGTTCATGAAGGATGACTGACGGGCTTGAGAAGAATTCAGCTGTCCGTTTTATTCACAACTCTACTAAAAATCATCAATAGATGTATTACTTTTAATTTAATTTAATGTGTAATCTTGTGTAATTTATTTTAATCGAATGTGTTTGACTCCTGGGAACGA

Function

symbol description
epn1 Predicted to enable clathrin adaptor activity and phospholipid binding activity. Involved in negative regulation of sprouting angiogenesis. Predicted to be located in presynapse. Predicted to be extrinsic component of cytoplasmic side of plasma membrane; extrinsic component of postsynaptic membrane; and extrinsic component of presynaptic membrane. Predicted to be part of clathrin vesicle coat. Predicted to be active in several cellular components, including Schaffer collateral - CA1 synapse; endosome; and postsynapse.

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG:

id description
K12471 EPN; epsin

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_05445824_05454816.mRNA True 2607 mRNA 0.51 11 5445824 5455416

Neighbor

gene id symbol gene type direction distance location
CI01000016_05405791_05407797 AICDA coding upstream 37861 5405791 ~ 5407963 (+)
CI01000016_05398036_05400369 NAT14 coding upstream 45418 5398036 ~ 5400406 (+)
CI01000016_05388832_05396460 ZNF628 coding upstream 48744 5388832 ~ 5397080 (+)
CI01000016_05381573_05383796 NA coding upstream 62006 5380917 ~ 5383818 (+)
CI01000016_05335334_05352325 RASIP1 coding upstream 93157 5335334 ~ 5352667 (+)
CI01000016_05475350_05482964 U2AF2, U2AF2A, U2AF2B coding downstream 19934 5475350 ~ 5483946 (+)
CI01000016_05488887_05502270 CACNG6B coding downstream 33471 5484205 ~ 5504239 (+)
CI01000016_05698858_05706081 NA coding downstream 243442 5698858 ~ 5706719 (+)
CI01000016_05797506_05798075 NA coding downstream 342090 5797506 ~ 5799585 (+)
CI01000016_05828974_05833309 JOSD2, JOS2 coding downstream 372982 5828398 ~ 5833377 (+)
G95880 NA non-coding upstream 11451 5425369 ~ 5434373 (+)
G95876 NA non-coding upstream 24056 5421167 ~ 5421768 (+)
G95803 NA non-coding upstream 27609 5412238 ~ 5418215 (+)
G95871 NA non-coding upstream 34121 5411482 ~ 5411703 (+)
G95824 NA non-coding upstream 70557 5371328 ~ 5375267 (+)
G95801 NA non-coding downstream 2426 5457842 ~ 5458207 (+)
G95805 NA non-coding downstream 6474 5461890 ~ 5462142 (+)
G95884 NA non-coding downstream 7302 5462718 ~ 5462924 (+)
G95885 NA non-coding downstream 7612 5463028 ~ 5463257 (+)
G95804 NA non-coding downstream 11254 5466670 ~ 5466983 (+)
G95792 NA other upstream 219883 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 609169 4829592 ~ 4837457 (+)
G95648 NA other upstream 1171919 4272636 ~ 4273905 (+)
G95439 NA other upstream 1581967 3862175 ~ 3862305 (+)
G96389 NA other downstream 1705225 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 2328649 7783987 ~ 7784996 (+)
G97824 NA other downstream 2558947 8014363 ~ 8015775 (+)
G98288 NA other downstream 3540682 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 4340215 9795950 ~ 9842576 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location