CI01000016_05891870_05892528


Basic Information

Item Value
gene id CI01000016_05891870_05892528
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 5891870 ~ 5892679 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_05891870_05892528.mRNA
TGCTGCTGTGTTCCTGTCTAATTCCTGGAGTCAGCTCCTCCAGCACCTCAGTAGAGTTCACCTCAAGTACAGGTTCATCAAAATTCCCGGATCGGCCAGATCTTTATGACTTCCCATCTGTTCAGTCATCGCCTGAAGGACTTCTCTCCTTAACTTCATCCTTCTTCACACAATGGCTCAATTTGAATTGTGCTTTTGGAGAGCATCACTGCAACTTCCCCACACCAAATGAAGAGGATCAAGAAAATCCAAAGGAGGAAGAGAATGTGGAGAAACGTGAACCGGTGGATGATCAACATCCTGTGATAGAAGGAGAGATAAAGACAGAAAAACAGCTTGACCCTGGTCCGACCAACAGCTATACTAAGACATGTTGCACTGGCTTCACTCACTGGAGCTTATCTTTTCTATGGATAACATCCAGTCTGATCTGGTGAAAGTCAAGAAATCTGTTTTAAATATGCCACAAAACTTGGCCAAAAGAAGGCTCCACTTGGAAAGGACTGCTACACTGTGTTGCCTTGACTTTAAGTCAGTTTGGATGCTAATTTTGATCAGTTTGGATGCTAATTTTGTTTTACACAGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_05891870_05892528.mRNA True 588 mRNA 0.43 2 5891870 5892679

Neighbor

gene id symbol gene type direction distance location
CI01000016_05878037_05885761 FLCN coding upstream 5678 5878037 ~ 5886192 (+)
CI01000016_05837368_05837667 NA coding upstream 53943 5836583 ~ 5837927 (+)
CI01000016_05828974_05833309 JOSD2, JOS2 coding upstream 58493 5828398 ~ 5833377 (+)
CI01000016_05797506_05798075 NA coding upstream 92285 5797506 ~ 5799585 (+)
CI01000016_05698858_05706081 NA coding upstream 185151 5698858 ~ 5706719 (+)
CI01000016_05894658_05908090 GRWD1 coding downstream 1979 5894658 ~ 5908539 (+)
CI01000016_05914765_05917918 ATG12 coding downstream 21388 5914067 ~ 5918052 (+)
CI01000016_05921722_05928898 NA coding downstream 28514 5921193 ~ 5929728 (+)
CI01000016_05942798_05943229 NA coding downstream 50119 5942798 ~ 5943450 (+)
CI01000016_05956820_05958904 NA coding downstream 63904 5956583 ~ 5958917 (+)
G96058 NA non-coding upstream 115560 5776060 ~ 5776310 (+)
G96048 NA non-coding upstream 135492 5756097 ~ 5756378 (+)
G96047 NA non-coding upstream 135976 5755638 ~ 5755894 (+)
G96035 NA non-coding upstream 159407 5732257 ~ 5732463 (+)
G96034 NA non-coding upstream 164795 5726845 ~ 5727075 (+)
G96076 NA non-coding downstream 30082 5922761 ~ 5922984 (+)
G96079 NA non-coding downstream 37713 5930392 ~ 5934791 (+)
G95967 NA non-coding downstream 91386 5984065 ~ 5984824 (+)
G96087 NA non-coding downstream 103819 5996498 ~ 5996720 (+)
CI01000016_05405791_05407797 AICDA other upstream 484007 5405791 ~ 5407963 (+)
G95792 NA other upstream 665929 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 1055215 4829592 ~ 4837457 (+)
G95648 NA other upstream 1617965 4272636 ~ 4273905 (+)
G95439 NA other upstream 2028013 3862175 ~ 3862305 (+)
G96389 NA other downstream 1267962 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 1891386 7783987 ~ 7784996 (+)
G97824 NA other downstream 2121684 8014363 ~ 8015775 (+)
G98288 NA other downstream 3103419 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 3902952 9795950 ~ 9842576 (+)

Expression


Co-expression Network