CI01000016_05942798_05943229


Basic Information

Item Value
gene id CI01000016_05942798_05943229
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 5942798 ~ 5943450 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_05942798_05943229.mRNA
ATGGCAACATCCGAGGACCTTTCATCCCAGTCTAACTCGACCCAAACCGTGAAATATGATCCAAAGTCTCAAACTGTAACGTTACCAAATGGGTTGGTTTCTGTGGCGGGTGTCACGGTGGTGACGGGGGGAGCGGAGCTGTCCTGTGGCTCCTGTATGTTGGCCTTTGGGGTTTGGGGCACTCTGGTTGGTTTGAGTGTTGTGGCACTGGGTTTATGGGACCATTTAGAGTACCAGAACAGTGGTCTGTCACACCTTCTGGCTCTTGGATTGGTACTGCTGCTTACCAGTACGAGCCTGGTAGTCATGATCTTTGGCCTCCGTTTCTTAATGAAAAAGAGAAGAATGATGGCCAGAAGAGAGAGGGCAGAAGCTAATTTAGTGTTGGTTAATGATTATGCAGAAGTTGTTTTAAAAAGAGTCACTGTGTAAAAGAGCAGCGAAGTGAAAAAATATGATGTGAGTTTTGTTCTCTCTGAATATGTCAGACTCCCCGCTGCTTCATCTTTCTATTTCTCCATCACTGTTTGCTTAATCATGAAAGAATGTCACAGGAAATCCATTGGGTTCACTGCTACAGGAAACACTTTGCTATTTCCTGTGTGATTTAAGAAACCACAAGAGACATTTGCTTCTGCGTTCATGTATATTTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_05942798_05943229.mRNA True 653 mRNA 0.44 1 5942798 5943450

Neighbor

gene id symbol gene type direction distance location
CI01000016_05921722_05928898 NA coding upstream 13070 5921193 ~ 5929728 (+)
CI01000016_05914765_05917918 ATG12 coding upstream 24746 5914067 ~ 5918052 (+)
CI01000016_05894658_05908090 GRWD1 coding upstream 34259 5894658 ~ 5908539 (+)
CI01000016_05891870_05892528 NA coding upstream 50119 5891870 ~ 5892679 (+)
CI01000016_05878037_05885761 FLCN coding upstream 56606 5878037 ~ 5886192 (+)
CI01000016_05956820_05958904 NA coding downstream 13133 5956583 ~ 5958917 (+)
CI01000016_05960829_05963788 FDPS, FPPS coding downstream 17379 5960829 ~ 5963788 (+)
CI01000016_05966893_05982233 RUSC1 coding downstream 20765 5964215 ~ 5982645 (+)
CI01000016_06030950_06038330 DAP3 coding downstream 87500 6030950 ~ 6038330 (+)
CI01000016_06038939_06045122 GBA coding downstream 95489 6038939 ~ 6045402 (+)
G96079 NA non-coding upstream 8007 5930392 ~ 5934791 (+)
G96076 NA non-coding upstream 19814 5922761 ~ 5922984 (+)
G96058 NA non-coding upstream 166488 5776060 ~ 5776310 (+)
G96048 NA non-coding upstream 186420 5756097 ~ 5756378 (+)
G96047 NA non-coding upstream 186904 5755638 ~ 5755894 (+)
G95967 NA non-coding downstream 40615 5984065 ~ 5984824 (+)
G96087 NA non-coding downstream 53048 5996498 ~ 5996720 (+)
G96092 NA non-coding downstream 132928 6076378 ~ 6078295 (+)
G96095 NA non-coding downstream 137302 6080752 ~ 6081244 (+)
G96096 NA non-coding downstream 137885 6081335 ~ 6118470 (+)
CI01000016_05405791_05407797 AICDA other upstream 534935 5405791 ~ 5407963 (+)
G95792 NA other upstream 716857 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 1106143 4829592 ~ 4837457 (+)
G95648 NA other upstream 1668893 4272636 ~ 4273905 (+)
G95439 NA other upstream 2078941 3862175 ~ 3862305 (+)
G96389 NA other downstream 1217191 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 1840615 7783987 ~ 7784996 (+)
G97824 NA other downstream 2070913 8014363 ~ 8015775 (+)
G98288 NA other downstream 3052648 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 3852181 9795950 ~ 9842576 (+)

Expression


Co-expression Network