CI01000016_06138000_06138287


Basic Information

Item Value
gene id CI01000016_06138000_06138287
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 6137607 ~ 6138425 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_06138000_06138287.mRNA
ACAGCGCGAGCGGTCCATGCTGTCACCCCGGTAACCCGCGCACTAAAATCTGCAGTTCACTGTGGCTCGGAAGACCATCCATCAAAAGTAAATGGTTAACGACTTCTTTGTACGACTCACATTCATCATCCAGTCTCCATGGCGCACGTCTTCATTAGAGACCCAAACTTCGCCTCTCCACCTTTTACCAAGCCCCTACCCCCCATATGCTCAGCTCTTTTCTTCCGCTTCAACAGCAGGGGTGAGGGGGAGACTAAAGACCCTCGGGGACACTGCTGCAACCTCCTGGCCTCTGCCAGGTCACCTTTTGTGACTGCGTCATTCCCTTCACTCGCGTTCTCCTGCTCCCGTCAAGATCTCTGGAATTTCCACCTCCCTCAGAAGACCCTCCGTGTCTCCCTCAGCCCCAAACGGGGAAGACGGTAACCACAACGGAGGCAGATCCAGTTACAGGAGCTTTGAGTGTGCGTTGATTTAGATAACCGCGGGAATGGACAAGAGGGACTGAACTTGACAGAGCTCTGTTTTAACAATCAGTCTGACAAATTGTCCTGAAATTTTATGCTCATATTCACATTTTTGTGTCCAACAGTTATTTGTACACAGCTTGTCTGCCACAGAGAGAGAGAGACATCTACATCCTATGTTCATTGGGTCTTGTTGAAAGTTTATTCTATTCTAGGCCTATAACCTATACTTGATATTATTATTATTATTATTATATTTATTTTTTTCTGTCGCTGTTTTTATTTTTTATTATAATTATGTTTTTTCTTTTTCTTTTTAAAATTTTGTATGTAAAACAAACAGGCCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_06138000_06138287.mRNA True 819 mRNA 0.44 1 6137607 6138425

Neighbor

gene id symbol gene type direction distance location
CI01000016_06131958_06135495 NA coding downstream 2112 6130778 ~ 6135495 (-)
CI01000016_06069691_06109173 ITGA10 coding downstream 28434 6069290 ~ 6109173 (-)
CI01000016_06048748_06054049 RNF115 coding downstream 83558 6048740 ~ 6054049 (-)
CI01000016_06018338_06023791 NA coding downstream 113816 6018330 ~ 6023791 (-)
CI01000016_05986400_05994821 TRIM109 coding downstream 142786 5986400 ~ 5994821 (-)
CI01000016_06146332_06147633 NA coding upstream 7798 6146223 ~ 6147667 (-)
CI01000016_06147867_06148327 NA coding upstream 9283 6147708 ~ 6148348 (-)
CI01000016_06162256_06162804 NA coding upstream 23729 6162154 ~ 6163022 (-)
CI01000016_06168667_06173080 DSCC1 coding upstream 30242 6168667 ~ 6173080 (-)
CI01000016_06253158_06263923 NA coding upstream 114406 6252831 ~ 6264056 (-)
G97310 NA non-coding downstream 42372 6094880 ~ 6095235 (-)
G97303 NA non-coding downstream 57111 6080274 ~ 6080496 (-)
G97201 NA non-coding downstream 152783 5984069 ~ 5984824 (-)
G97193 NA non-coding downstream 173266 5960341 ~ 5964341 (-)
G97282 NA non-coding downstream 178134 5952958 ~ 5959473 (-)
G97333 NA non-coding upstream 4322 6142747 ~ 6143053 (-)
G97335 NA non-coding upstream 13016 6151441 ~ 6151680 (-)
G97224 NA non-coding upstream 74127 6212552 ~ 6212818 (-)
G97187 NA non-coding upstream 74570 6212995 ~ 6213650 (-)
G97237 NA non-coding upstream 75487 6213912 ~ 6214493 (-)
CI01000016_05412782_05415867 NA other downstream 719390 5412248 ~ 5415906 (-)
CI01000016_05325805_05330265 COX6B2 other downstream 806761 5325519 ~ 5332874 (-)
CI01000016_04921091_04922518 NA other downstream 1214203 4918975 ~ 4922518 (-)
CI01000016_03921124_03930996 NA other downstream 2206556 3920055 ~ 3931162 (-)
CI01000016_03647744_03675574 NA other downstream 2472294 3647653 ~ 3675585 (-)
G97341 NA other upstream 20561 6158986 ~ 6159721 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other upstream 2750408 8888833 ~ 8894737 (-)
CI01000016_08926089_08945071 NA other upstream 2798364 8925960 ~ 8945229 (-)
G98679 NA other upstream 3096571 9234996 ~ 9239929 (-)
G98691 NA other upstream 3117677 9256102 ~ 9257611 (-)

Expression


Co-expression Network