CI01000016_06158996_06159538


Basic Information

Item Value
gene id CI01000016_06158996_06159538
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 6158722 ~ 6159725 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_06158996_06159538.mRNA
CTATATAAACCTGAACTTAGTCAAAGCACTGACAAACACCTGACTAGACACAATATGGTGATATGTTGTTTCTAATTGTCTTATTTCTGTTGTCTTGAATGTTTTTTTTCCTCTGTTGTTAATTTGTCATCTAGTACTTATTAATTAACCAATTTTGATTGTACTGCATTTGAAATATGTACAGTTTAACTTGTTAATGCTGACAAAATTGGTACCAATCTGCATTATGAAATAACATTTTTGCACTTGCACAAAACTTCCTCAGATTGTAAAAATGCTGTCATTCTTGGTCATCTTGACTGTCACGCTCCACACTTGTCTGAGTGAGCTGGACATACTGCACCCATCTGAGCCCTGCACTAAAGCGAAGAAAAAGGATGCGTATGATACTTTCCTTCACCGTCACCTACGCAAGGACATCCCAACTGATCCACGCAATCTAAGAGAATGGCAGAAGTTCATTACCAAAATCAAAACCTGGGACAGGCCTATTCAATCATTCTTTCCCATCAGTGAAGCAAGAATGGTGATGGCTGTGTGTTCATCAGGAGGAAAGGAGTATCAGGGAAACCTCTGCATCAGCAAGAAGCCTCTCAAGTTCTTCACTGTTTACATCAAGAATAAGAAGCAGGTCAAGAAAGTCAAAGTTCAGGAACAACATGCTATTCTTGGCTGTGATAAAATTGAAAATAAATGCAAACCTGTTCATTTTGAGGCAAACACAAATGATGCTACACCAGATAATAACAAAGCAGACTGCAGTAAAGCAATGGTAAATGCAAGCTTTATACCTTTTGAAGAGCTGTTTGAAATCTAGACACATGACCTGCAGTAAAAATGTCTGGATGTTACTTTGTAGCTTTGCTGCTTTCATTTTTATCTAACCAATGCTGAAACTGCAGTAATATGAGGATGTCTGCGCATATTCATAATGAATGCAAATTGTGAACACACAAACATTTTCTATATGCTCTTGCCTCATTAATTCAATCATTTATTACTAA

Function

NR:

description
Carbonic anhydrase 14

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_06158996_06159538.mRNA True 1004 mRNA 0.37 1 6158722 6159725

Neighbor

gene id symbol gene type direction distance location
CI01000016_06058748_06068258 POLR3C coding upstream 90074 6058748 ~ 6068648 (+)
CI01000016_06038939_06045122 GBA coding upstream 113320 6038939 ~ 6045402 (+)
CI01000016_06030950_06038330 DAP3 coding upstream 120392 6030950 ~ 6038330 (+)
CI01000016_05966893_05982233 RUSC1 coding upstream 176077 5964215 ~ 5982645 (+)
CI01000016_05960829_05963788 FDPS, FPPS coding upstream 194934 5960829 ~ 5963788 (+)
CI01000016_06174800_06210259 DEPDC6, DEPTOR coding downstream 15075 6174800 ~ 6211031 (+)
CI01000016_06270425_06375483 COL14A1A, COL14A1 coding downstream 110700 6270425 ~ 6375483 (+)
CI01000016_06398455_06420062 MTBP coding downstream 238730 6398455 ~ 6420138 (+)
CI01000016_06684506_06687365 NA coding downstream 524781 6684506 ~ 6687405 (+)
CI01000016_06756366_06782229 SETD2 coding downstream 596641 6756366 ~ 6782619 (+)
G96096 NA non-coding upstream 40252 6081335 ~ 6118470 (+)
G96095 NA non-coding upstream 77478 6080752 ~ 6081244 (+)
G96092 NA non-coding upstream 80427 6076378 ~ 6078295 (+)
G96087 NA non-coding upstream 162002 5996498 ~ 5996720 (+)
G95967 NA non-coding upstream 173898 5984065 ~ 5984824 (+)
G95949 NA non-coding downstream 53253 6212978 ~ 6213633 (+)
G96011 NA non-coding downstream 80111 6239836 ~ 6247237 (+)
G95974 NA non-coding downstream 216375 6376100 ~ 6376980 (+)
G96163 NA non-coding downstream 324852 6484577 ~ 6484776 (+)
G96236 NA non-coding downstream 531465 6691190 ~ 6691843 (+)
CI01000016_05405791_05407797 AICDA other upstream 750859 5405791 ~ 5407963 (+)
G95792 NA other upstream 932781 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 1322067 4829592 ~ 4837457 (+)
G95648 NA other upstream 1884817 4272636 ~ 4273905 (+)
G95439 NA other upstream 2294865 3862175 ~ 3862305 (+)
G96389 NA other downstream 1000916 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 1624340 7783987 ~ 7784996 (+)
G97824 NA other downstream 1854638 8014363 ~ 8015775 (+)
G98288 NA other downstream 2836373 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 3635906 9795950 ~ 9842576 (+)

Expression


Co-expression Network