CI01000016_06692104_06696977


Basic Information

Item Value
gene id CI01000016_06692104_06696977
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 6691887 ~ 6697324 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_06692104_06696977.mRNA
AAAGCGAAGTTGTTGAGGCATTAATGAAGTTTATGCAAGAAACTGGTATAGGTAGAAGAATTTAAAAGATCAATGAAGCCATGATTATACACACTCCAATATAGTAGGTGGCGGTATGCATCTTTAATGATGGTCTGTAACCCGCCATAAAACTAAAAGAAGAAGAAGGAATCAGGTGCGAAGGTGGAGAGAGTACACAGCTTTCGACCACACATTGTTTGATTGACCAAACATTACCCTTTTTACTGCTTTCTTTTGAAAATAAATACTTAATTTAGCATTTACATTGGAATGGAGGTCATTTCTTGGATTATGTGCATCAAAGAATCCCTCAACCTTTATACAAGATGGGTGGCTTTAATTTTGGATTAATTGTGGACAAAAAGCCCCTACGTCTTCAAGTCGAAAGCTTCTCTGAGCTGGGATTTGGATGGAGCAAACAACCAGCATTTGACCAGTATGTCTCTTGCTGTGTCAAGAAATATGAAGAAAGAGTGTGGGTTGGAATTTTGTGTTTGAAAGCACTGCCGTTGTGCTTCATGATGGATGTGAATATGGAGGTTGCAAAAGATGATGAATTACGGGATGATAAAATTCCAGAAGCCTTCACAGTTCAGTGGCAGAATTGGTTGGAAGAACTTCCTCAGTTACATGCGTTTCAAATAAATAGATGTCTGGTTCCAGATGGATTTGGAGAGGCTACTACCTGCCAATTACACAATTTTTGTGATGCTAGTGAGATGGCATATGGAACAGCATCATATTTGAGCATCATATTCTTACAAATCAATATGGCAATATGGATTGATGGACCAGCATTTCTTCAGATGGCAGAGTTCGAATGGCCAAAGCCAGTTCTACTTGGTTCAATAGCTGCTGATGATCCTGAGGTAAAGAAGGACATCAAGTGTCTACAAAAGGAAAAAAATGATGTTGGAACACGGAGTGCAATATACAAGCTAGATCCTCAAATGCTTGATGGACTCATAAGAGTTGGTGGTAGACTTTGTCGAAGTGCACTGCCTACTGAAGAGAAACATCCTGTTATCCTTTCAAAAAGAAGCCATGTAACCACACTTGTTATACGGCACATGCATAAGCAAGTTGGACACCGAGGAAGGAACCATACTCTCTCAAAATTGAAAGAGAAGTTTTGGATTCCTCATGCCAGTGCTGCTGTTAGAAGGGTGATAAGGAATTGCATTACTTGCCAGTGCTTGCATGCACTGAAAGGAGAACAGAAAATGTTTGACCTTCCTGAAGATCGCTTGGAGGCAGATCTTCCTCCATTTACAAATGTGGGGGTAGATTATTTTGGACCAATTATGGTAAAAAGAGGAAGAAGCAAGTGGTCTGGCCTGGAAGAACGCAGTCCAAATGTAAGCCTCCAGCACATCCTGTCAGGCTGTAAGGTGGGGCTCGCACAAGGCCGCTATCAGTGGGACGCGATAATGTTGGTTGGTGGAGATGTTGGAGGCACACAGACAGGATACAAGTAGAGGACAGTTGCCATCAGTGTCATCATGCAGGGGTGGAAGTGAGACGTCCCAGGGTTAAAGCCGTAAACCGTCCCCGGGGTCCCTGGCTGATGACCCTGCAGCTGAGCTATAGGCCATGGCCATAGGCTATAGCTGCCAAAGCAGGGGAACCTGCCAAATTATGAGAGCATGATATTAAGGTCAAGAGGTGCCAAGAAGGCCTGAATCTATCAAAAAA

Function

NR:

description
hypothetical protein EH28_00938, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_06692104_06696977.mRNA True 1716 mRNA 0.43 5 6691887 6697324

Neighbor

gene id symbol gene type direction distance location
CI01000016_06649431_06675045 ANKIB1, ANKIB1B coding downstream 14622 6648456 ~ 6677265 (-)
CI01000016_06508677_06514489 HAS2 coding downstream 177398 6508137 ~ 6514489 (-)
CI01000016_06424554_06462224 SNTB1 coding downstream 229269 6424115 ~ 6462618 (-)
CI01000016_06387119_06398090 MRPL13 coding downstream 293797 6386582 ~ 6398090 (-)
CI01000016_06253158_06263923 NA coding downstream 427831 6252831 ~ 6264056 (-)
CI01000016_06712886_06713770 NA coding upstream 14538 6711862 ~ 6715921 (-)
CI01000016_06720165_06726223 STMN2A, STMN2B, STMN2 coding upstream 22181 6719505 ~ 6726223 (-)
CI01000016_06729420_06733577 UPP1 coding upstream 31453 6728777 ~ 6733577 (-)
CI01000016_06743403_06745585 NA coding upstream 45700 6743024 ~ 6745773 (-)
CI01000016_06788704_06796860 NRADD coding upstream 91348 6788672 ~ 6796860 (-)
G97517 NA non-coding downstream 49082 6642270 ~ 6642805 (-)
G97516 NA non-coding downstream 49775 6641867 ~ 6642112 (-)
G97469 NA non-coding downstream 140858 6486089 ~ 6551029 (-)
G97468 NA non-coding downstream 204684 6486730 ~ 6487203 (-)
G97465 NA non-coding downstream 221116 6470432 ~ 6470771 (-)
G97428 NA non-coding upstream 29803 6727127 ~ 6727509 (-)
G97530 NA non-coding upstream 107610 6804934 ~ 6805338 (-)
G97545 NA non-coding upstream 247021 6944345 ~ 6944646 (-)
CI01000016_06998707_07047702 NA non-coding upstream 347297 6998534 ~ 7047702 (-)
G97557 NA non-coding upstream 348333 7045657 ~ 7045896 (-)
G97341 NA other downstream 532166 6158986 ~ 6159721 (-)
CI01000016_05412782_05415867 NA other downstream 1273670 5412248 ~ 5415906 (-)
CI01000016_05325805_05330265 COX6B2 other downstream 1361041 5325519 ~ 5332874 (-)
CI01000016_04921091_04922518 NA other downstream 1768483 4918975 ~ 4922518 (-)
CI01000016_03921124_03930996 NA other downstream 2760836 3920055 ~ 3931162 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other upstream 2191509 8888833 ~ 8894737 (-)
CI01000016_08926089_08945071 NA other upstream 2239465 8925960 ~ 8945229 (-)
G98679 NA other upstream 2537672 9234996 ~ 9239929 (-)
G98691 NA other upstream 2558778 9256102 ~ 9257611 (-)
CI01000016_09510177_09512196 ID4 other upstream 2812298 9509622 ~ 9512428 (-)

Expression


Co-expression Network