CI01000016_06813604_06813789


Basic Information

Item Value
gene id CI01000016_06813604_06813789
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 6809807 ~ 6814285 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_06813604_06813789.mRNA
GAAACCAGATGGAACCAGGCAGGAACGGTGACGCTATCGTCTCTTGTGGAGGTTTTGCTGAAGGCACGTGGGGCTCATTTACCAGGAGGTTCAACAGGGTTGTATTCGGTCTCTCCTGAGGACACCTGCGAGATTCTGCGTGTGGATCCCCACAGTCGGCGGGAAAACTGCCCCGATCGCACCTGAATTAAGACAAATGTTTAAATATTATATATATAATGTTTAATGTATAATGTTTTAAATATTATATATAATGTTTAAATGTTATATATTTTTTTTTTAGTCCTTTAGAAAAGAAGGTGCTGATTTAAGTGAAAAAATCAACACATCTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_06813604_06813789.mRNA False 334 mRNA 0.39 1 6813604 6813937

Neighbor

gene id symbol gene type direction distance location
CI01000016_06756366_06782229 SETD2 coding upstream 30985 6756366 ~ 6782619 (+)
CI01000016_06684506_06687365 NA coding upstream 126199 6684506 ~ 6687405 (+)
CI01000016_06398455_06420062 MTBP coding upstream 393466 6398455 ~ 6420138 (+)
CI01000016_06270425_06375483 COL14A1A, COL14A1 coding upstream 438121 6270425 ~ 6375483 (+)
CI01000016_06174800_06210259 DEPDC6, DEPTOR coding upstream 602573 6174800 ~ 6211031 (+)
CI01000016_06890651_06904100 NA coding downstream 76209 6890146 ~ 6904634 (+)
CI01000016_06954301_06958598 NA coding downstream 140364 6954301 ~ 6958603 (+)
CI01000016_07178060_07180135 NA coding downstream 364123 7178060 ~ 7180810 (+)
CI01000016_07214392_07233533 RXRBB, RXRBA, RXRB coding downstream 400455 7214392 ~ 7234962 (+)
CI01000016_07445055_07456795 SLC6A19B coding downstream 631118 7445055 ~ 7457431 (+)
G96257 NA non-coding upstream 6578 6806721 ~ 6807026 (+)
G95992 NA non-coding upstream 86108 6727127 ~ 6727496 (+)
G96236 NA non-coding upstream 121761 6691190 ~ 6691843 (+)
G96163 NA non-coding upstream 328828 6484577 ~ 6484776 (+)
G95974 NA non-coding upstream 436624 6376100 ~ 6376980 (+)
G96299 NA non-coding downstream 109422 6923359 ~ 6924302 (+)
G96305 NA non-coding downstream 116469 6930406 ~ 6935195 (+)
G96308 NA non-coding downstream 121751 6935688 ~ 6936001 (+)
G96314 NA non-coding downstream 146500 6960437 ~ 6960751 (+)
G96317 NA non-coding downstream 149422 6963359 ~ 6963881 (+)
CI01000016_05405791_05407797 AICDA other upstream 1405741 5405791 ~ 5407963 (+)
G95792 NA other upstream 1587663 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 1976949 4829592 ~ 4837457 (+)
G95648 NA other upstream 2539699 4272636 ~ 4273905 (+)
G95439 NA other upstream 2949747 3862175 ~ 3862305 (+)
G96389 NA other downstream 346704 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 970128 7783987 ~ 7784996 (+)
G97824 NA other downstream 1200426 8014363 ~ 8015775 (+)
G98288 NA other downstream 2182161 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 2981694 9795950 ~ 9842576 (+)

Expression


Co-expression Network