CI01000016_07759095_07759370


Basic Information

Item Value
gene id CI01000016_07759095_07759370
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 7759095 ~ 7761274 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_07759095_07759370.mRNA
ATGATCCTGTTTTCAGCCTGTTGCATCTGTGGACTTATTGGGGGAATTCTCAACGTTCAGTTTGTGCGTGCGATGGTGAAACGAACGAACAGCCTGTACTCTTTGCACCTGGCCTTCCTCTGCCTGGCCAGCCTAGGCATCTTGGGCTGCACCCTCTCCACCTGGCTCACCTGCAGACTTGCCAGCAGTGAACAGAAAAGACTGTTTCTGGAAAGGGATCTGTCCCTGCATCATTCCGTGGAGATGGGCGACAAGGTGAAGGCGGTGTGCGGGTGAAATATCAAGGGACTGTGAGATCTATTTTGCTTTTATTGAAAATGTAAATGTGTAGATTTGGTTTGTAGAATCAAAATCCCTTTCAGACAAGTTGGTGGCCATCTTTGAAACGCCATTATGGAAGCTATTTCAGTCATGCAAGTACAGCTTCTCTTTGAATGGGGAAACATTGAATTCTCCAAAGCTGTTCACCAAGCAAGCTTACGATTAAATTTCATATTTGAAATCACCAATGAAATCTGACAATAACTGTCTCATCAATTGTTTCTAAACACTCAAATCATGACAAAAAAAACTGCATTTATCAGGTTGGACCAGCTAATGTGCATGTGCAGTCCTAAGCGCGCGACTCAGAACACTAGCTGTGTCCCAATTCAGAGGCTGCATCCTTCGAAGGCCACATTTGAAGGCCGATTGTGTCACCACGGTGCGGTGAAGGCTGTCCCAATTCAAAAGCTCCTTCAAATGCGGCCTTCAAATGCATTGTTCGTTTCCTGTGCAATGAAGGATATAACAGATGGATCCTTTGCGGCCTACTCCAGAATTCATTGCACGCTGGTGACTACAGGTTTTTTTTTTTTAGAGATATTGCCAAATTACACTTTTATTGGGTTTCAACTTGCTCGAATGTCTAATGATACAAATGTAAAAAAAAAAAAACAAAAAAAAAAAACTTTAAAGCGGTTCAAATGTTGACATACCTTACTAAGATGCGATTATACGCCGATCAGGCATAACATTATGACCACTGACAGGTGAAGTGAATAACACTGATTCTCTCTTCATCACGGCACCTGTTAATGTGTGGGATATATTAGGCAGAAAGTGAACATTTTGTTCTCAAAGTTGATGTGTTAGAAGCAGGAAAAATGGGCAAACGTAAGGATTGACAAGGGCCAAATTGTGATGGCTAGACGACTGGGTCAGAGCATCTCCAAAACTGCAGCTCTTGTGGGATGTTCCCGGTGTGCAGTGGTCAGTATCTATTAAAAGTGGTCCAAGGAAGGAACAGTGGTGAACCGGCGGCAAGGTTCTTGGGCGGCCAAGGCACACTGATGTACGTGGGGAGCGAAGGCTGGCCCGTGTGGTCCGATCCAACAGACGAGCTACTGTAGCTCAAGTTACTCAAGAAGTTAATGCTGGTTCTGATAGAAAGGGGCTGCATAGACGCAGACCAGTCAGGGTGCCCATGCTGACCCCTGTCCACCGCCGAAAGCGCCAACAATGGCCACGTGAGCATCAGAACTGGACCACGGAGCAATGGAAGAAGGCGGCCTGGTCTGATGAATCACGTTTTCTTTTACATCACGTGGATGTCTGGGTGCGTGTGCATCGCTTACCTGGGGAACACATGGCACCAGGATGCACTATGGAAAGAAGGCAAGCCAGCGGAGGCACTGTGATGCTTTGGGCAATGTTCTGCTTACCCTTTCATGGAAACGGTATTCCCTGGTGGCTGTGGCCTCTTTCAGCAGGATAATGCACCCTAATACAAAGCAAAAATTGTTCAGGAATGGTTTGAGGAGCACAACAACGAGTTTGAGGTGTTGACTTGGAATCCAAATTCCTCAGAACCCATTTAACAATGCTCATTCCGACCTTTGTGGCCTTCGAAGGCGTGGCCTGTGAAGTCTGCGTCCTTCGAAGGATGCAGCCTCTGAATTGGGATGCAGCTACTGACTGTTTCAATAGCAACTGGAGCTTCTAAATGCAGATGTAATGACGCAATGGCTTTATTCTGCCATATTGCATGTTGCGCTTTCTCCTATTCATAGTAATATGAGTGCACCGTCTTTGTATATCTAAAGTCTTTGGTAGAATTACTTTAAAGTTTAAGTTGAGTCATGATTATTTGTCTTTCATGAGGTGCTGTTTTGTTTCATGTCACAGTTAAAGTTATAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_07759095_07759370.mRNA True 2180 mRNA 0.45 1 7759095 7761274

Neighbor

gene id symbol gene type direction distance location
CI01000016_07743396_07746536 MACC1 coding upstream 11712 7743088 ~ 7747383 (+)
CI01000016_07711605_07715888 SP8, SP8B coding upstream 42834 7711605 ~ 7716261 (+)
CI01000016_07484583_07551063 NA coding upstream 208032 7484583 ~ 7551063 (+)
CI01000016_07463735_07471367 NA coding upstream 287267 7463735 ~ 7471828 (+)
CI01000016_07445055_07456795 SLC6A19B coding upstream 301664 7445055 ~ 7457431 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S coding downstream 22713 7783987 ~ 7784996 (+)
CI01000016_07851297_07854401 NA coding downstream 89482 7850756 ~ 7854610 (+)
CI01000016_07937188_07955977 ANKRD44, ANKRD28B, ANKRD28 coding downstream 175914 7937188 ~ 7956457 (+)
CI01000016_07956184_07965721 C16H2ORF66 coding downstream 194797 7956071 ~ 7965940 (+)
CI01000016_07969424_07983149 HACL1 coding downstream 207054 7968328 ~ 7983566 (+)
G97724 NA non-coding upstream 106742 7652042 ~ 7652353 (+)
G96518 NA non-coding upstream 204555 7554210 ~ 7554540 (+)
G96453 NA non-coding upstream 428084 7329766 ~ 7331011 (+)
G96283 NA non-coding upstream 447217 7310044 ~ 7311878 (+)
G96415 NA non-coding upstream 472495 7285071 ~ 7286600 (+)
G97760 NA non-coding downstream 10364 7771638 ~ 7771965 (+)
G97764 NA non-coding downstream 16797 7778071 ~ 7778392 (+)
G97745 NA non-coding downstream 64114 7825388 ~ 7827695 (+)
G97746 NA non-coding downstream 84642 7845916 ~ 7847529 (+)
G97747 NA non-coding downstream 86383 7847657 ~ 7859181 (+)
G96389 NA other upstream 597805 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 2351232 5405791 ~ 5407963 (+)
G95792 NA other upstream 2533154 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 2922440 4829592 ~ 4837457 (+)
G95648 NA other upstream 3485190 4272636 ~ 4273905 (+)
G97824 NA other downstream 253089 8014363 ~ 8015775 (+)
G98288 NA other downstream 1234824 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 2034357 9795950 ~ 9842576 (+)
G99041 NA other downstream 2163144 9924418 ~ 9925654 (+)

Expression


Co-expression Network