CI01000016_07851297_07854401


Basic Information

Item Value
gene id CI01000016_07851297_07854401
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 7850756 ~ 7854610 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_07851297_07854401.mRNA
TTATAAATAGCAACATAAAAGCAAGTGGTGCAATCTTAGACTATGACAAAACCCACACCCAATTCACCACCCAAACTGGCTGCCATGGCAACGCTGGCGACATCATAATGACTCCTCTTCCTGCAGATATTGAGCTGCGCTGTGTGGTGTCTCCTCCCCGAGAGCACCCATGGATATTATATCATCCCTTATATAAGACAGAAACATACATATACACACACACACACAAGCGCTCCCTCTTTCTGTCGAAACTGATACACATCGGCTATGCCTGTCAGCTCCAGTTGAGCTCGAAGCAAGCATTTGTAGTCAACTTCTGGGTGTTTAGCAAAAATTCACCTTGGTTTGTTGTCGTGATGGCACTTCTTGGAAGAGAGCCAAGTTTGAAGAGACAGTTGCAGCTCTCTGTAGTGAGGCAAACAGATGACCCTAAGCATCCTGGAATGATGGGGGGAATATTAATTCTGACTTGAGAGAGCTCTTTACAAAGAGCAGCCTGTGTTCTTACAGCACTCATGGAGTCAGCCAATGAGCTTCAACAATGAGTCACAGGCATTGGGCTCGCTGCCCTAATGGAGCTAAAAATAGCCTCAGAAACACCTGCTGGCTTGGAGCGCTCGCCACGGTGATATCTCATTTATCTTATGTTTCCCTGCTTGCCCTCCCCACTAGAGTCATTAAAAAGATACACTTTGATCAACCATCCAGCCAAGCTCTCAGCAAAGAAACCTCAGGGCCAGACTCAAGGGATATGGTGACTCATCTGCTGTACTACATTTCCCACAATCCCTTGAGCAATACATTTCTCATAGACTCATGTTTCTCATTACCGCTGATTACAGAGATGATCAAAGCGTCAAATTTGTAGTGCTGCATCCAGCCACAAAAGCAAACCTCCCACACACCGTTAAGTGAAAAGGTACTAAATTAGACTCTTAATTAACCGTCTATGCATACATGACACTCTTTATTGGGAGAAATGTGTCACACAATGATTTGCTACCTTTTAATTTGAAAGGAAATTTACTTCAGTTTAAATTGGCTTGAGAGAGTCAGCGGTAATGTTGAATAACTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_07851297_07854401.mRNA True 1077 mRNA 0.44 2 7850756 7854610

Neighbor

gene id symbol gene type direction distance location
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S coding upstream 65760 7783987 ~ 7784996 (+)
CI01000016_07759095_07759370 NA coding upstream 89482 7759095 ~ 7761274 (+)
CI01000016_07743396_07746536 MACC1 coding upstream 103373 7743088 ~ 7747383 (+)
CI01000016_07711605_07715888 SP8, SP8B coding upstream 134495 7711605 ~ 7716261 (+)
CI01000016_07484583_07551063 NA coding upstream 299693 7484583 ~ 7551063 (+)
CI01000016_07937188_07955977 ANKRD44, ANKRD28B, ANKRD28 coding downstream 82578 7937188 ~ 7956457 (+)
CI01000016_07956184_07965721 C16H2ORF66 coding downstream 101461 7956071 ~ 7965940 (+)
CI01000016_07969424_07983149 HACL1 coding downstream 113718 7968328 ~ 7983566 (+)
CI01000016_07998560_08008403 COLQ coding downstream 143950 7998560 ~ 8008446 (+)
CI01000016_08034844_08037586 FKBP14 coding downstream 180234 8034844 ~ 8038025 (+)
G97746 NA non-coding upstream 3227 7845916 ~ 7847529 (+)
G97745 NA non-coding upstream 23061 7825388 ~ 7827695 (+)
G97764 NA non-coding upstream 72364 7778071 ~ 7778392 (+)
G97760 NA non-coding upstream 78791 7771638 ~ 7771965 (+)
G97724 NA non-coding upstream 198403 7652042 ~ 7652353 (+)
G97788 NA non-coding downstream 51614 7906224 ~ 7906558 (+)
G97826 NA non-coding downstream 204359 8058969 ~ 8063310 (+)
CI01000016_08270091_08279026 HIBADH, HIBADHA, HIBADHB non-coding downstream 395778 8268720 ~ 8279924 (+)
G96389 NA other upstream 689466 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 2442893 5405791 ~ 5407963 (+)
G95792 NA other upstream 2624815 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 3014101 4829592 ~ 4837457 (+)
G97824 NA other downstream 159753 8014363 ~ 8015775 (+)
G98288 NA other downstream 1141488 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 1941021 9795950 ~ 9842576 (+)
G99041 NA other downstream 2069808 9924418 ~ 9925654 (+)
G99410 NA other downstream 2379790 10234400 ~ 10236851 (+)

Expression


Co-expression Network