XLOC_007927 (slc7a2)


Basic Information

Item Value
gene id XLOC_007927
gene name slc7a2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 30367602 ~ 30390145 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00015464
GAAGAATGCTAGAACATTGCCTCACATTTGGTCGCTCCCTTGTGAGGAGGAAGAATGTGGACCAGGGCTGTCTGGAGGAGTCCAAGCTGTGCCGCTGCCTCTCAACTGTTGATCTCATTGCTCTGGGGGTTGGAAGCACACTGGGGGCCGGTGTCTATGTACTCGCTGGTGAGGTGGCCAAAGGCAGTTCCGGCCCCAGCATCGTTGTGTCCTTCCTCATCGCTGCATTAGCATCTGTGATGGCTGGTTTGTGCTATGCTGAGTTTGGTGCCCGGGTACCCAAGACTGGCTCTGCCTATCTGTACAGCTATGTGACGGTAGGAGAGCTCTGGGCTTTCATCACCGGATGGAACCTCATTCTGTCATACGTCATCGGCACTTCCAGTGTGGCACGTGCCTGGAGTGGGACATTTGATGAGATTATAGGCGGTCACATTGAAAAATTCTGCAAAATGTACTTCAAAATGAGTTTGCCTGGCCTGGCGGAGTACCCTGATTTCTTTGCTGTTTGCCTGATCTTACTTCTGTCAGGCCTACTCTCCTTTGGGGTGAAGGAATCAGCCTGGGTCAACAAAATCTTCACAGCAGTAAATGTGCTTGTGCTCATGTTCGTTATCATCTCTGGATTTGTCAAAGGAGACTCTCTCAATTGGAACATATCAGAGGAATCGCTCGTAAATTACACAGTTGTCAAAAGAAACATCTCGAGTGCTGCTAATGTCACCAGCGATTATGGGGCAGGAGGCTTTTTTCCGTATGGATTTGGCGGAACGTTGGCTGGTGCGGCCACCTGCTTTTACGCCTTTGTGGGATTCGACTGTATTGCAACCACAGGTGAAGAGGTGAAGAATCCCCAGAGGGCCATTCCCATTGGCATAGTGGTTTCCCTTCTGGTCTGCTTCCTTGCCTACTTTGGTGTTTCAGCAGCCCTCACCCTCATGATGCCCTACTATCTGCTGGATGAGAAGAGTCCTCTACCTTTGGCTTTTGAGTATGTAGGCTGGGGGCCTGCAAAATATGTAGTTGCGGCAGGATCACTTTGTGCTCTTTCAACCAGTCTGCTGGGCTCCATTTTCCCAATGCCACGTGTAATCTATGCTATGGCACAGGATGGGGTGCTTTTCAAAGTGTTAGCCCAAATCAATCCTAAGACGAAGACCCCTCTTATTGCAACAATGTCTTCAGGTGTAGTTGCAGCTATCATGGCTTTTCTGTTCGACTTGAAAGCGCTGGTGGATATGATGTCTATTGGAACATTGCTGGCTTATTCCCTTGTGGCTGCTTGTGTTCTTATACTCAGATATCAGCCAGATGCTTCGTTCGAGAGGTCGAGGATCAGTGAAGGGAAGGAGGAGGTCGGAGAGTCTGAACTGACAGAGTCTGAGTCTCATCTGAACATGCTGAAGGATGGAGGAGTAACGCTGCGCTCTCTGCTCCATCCTCCACTGCTGCCCACTAAAAATACCTCCAGTGTGGTCAACGTGTCTGTCATCATCACAGTGCtggttgtgtgtgttgtgagcaCACTGAACACATACTACGGACAAGCCATTATTGCAATGGAGCTTTGGGCACTGGGAGTATTAGCTGCATCACTGTTCATCTTCATCATATGTGTCTTTCTTATTTGTAGACAACCACAAACAAGGAAGAAGGTTTCCTTTATGGTTCCTCTTTTGCCCTTTCTACCCATCTTGAGTATATTTGTCAATGTGTACCTCATGGTTCAGCTCAGCGGAGACACGTGGATCCGTTTCTCCATCTGGATGGCCATAGGTTTTCTCATCTATTTCGGCTATGGGATGTGGCACAGTGATGAACGCAAGCGACATCTACAGAACTGTGCTGTCGCAACAGAGAAAAAGACACTGACCGGAAATGAAGGCTTTGTGGAGAAcaagacacacacagagaagacCAGCCCATGCTAAAGAGCAGAAGACCAACTCTCACTTTAACTATAGCTGTTATTCACAGCGTTCCCCAGCCGGCTGACAGACGTAAGCTCTGTGCTTTCAGTCACTGCCGTCATGAACAATTACTGAAACACTTCTCACTGCTGATGTGAGTTTATAATGTAGTACAGTAGGTCATTAGGGGGGTACGATCTGACAAAACCAATGCTTCGATTATAGAAATGACCCTCAAAATAATGAAAATCAATATAAATTGTCATTTGACTTATATTCATGGTAGTTTCCGATAATAATGAATAGTGACCAAATGATTTTTGTATACTTGGATTTCTCATCGCAATATTTAGAACTTTTTAAATAGCATTGAAGGGCTGTCAAATATTTACAATCCCTTGAAGACAAACCTCAGCATGTGAGTGATTTGATTTCAGTGTTTGGATGAGAAAGGGAAAGCTTGTGCCTTTTTTTCATTACAAAAAAGTATTATGATTTCTGCAGTCAGTCTCTCAAGTTTacttttactgtgaaagtaaatataacaacagtaatattttactacagTATTCTTAGTTGGGAGAAATAAGTGTAAAATGATAAGTGTCCTTATCGAATGTGGGAtattaacactttaaaaaatatttgtaaatggaCAGTTTTCCCTATTTTGAGATTTATGTTTTTCCCctcttatttatgcttttgaattgcattattggaccTTAATTTTTACTTCAAAAGATTTGGATGAAAATTTGtccaaaaaaaagtcaataaaattcactttggtaaactgtagaatttaattttcaacataaaaagtgGACAGAGCTGAGATAAAActcacataatgcaattcacaaccgtaaataaacataaaacaacagatgaataattaacagatttttttcagtgcaaaTAATGGTCTAACTTTGATTTAGAATTAATTCTATTGACTACATCTTTCTGAATGTGCCAGAGATGTTAAGCTgctcagataaaaaaataataataatgttttcttgTATTAAACACTAGTTCCTTATTTTTACCCACGTTATTTGTGTTAGCATTGAATGTTTGACAGGACATTCTACTACAGTATTCATACAGTAGGTCAACCTGTTGTTTAACAACCATAAGGTTTGAAGACGTTAAAGAGGAGCAAGTAATCAGTGTTTTGTCTTGTACAGTTACGTTTATTCAATTTGATTTCTTTCTATATTTGTTTACTTCacagagacttttattttgtttttgatgaATAACAATCATTGGCTGTTGTCGTTTGAAAATTGACAATCTGTTTAATTCAGTTAATGATGGAAAGTGTTTCTTCTGCTAACTAATGGTCTTCTGTTGTGCCACTAATGCatgaatgtattattttgttttctctttAGAGCTTGTGTATAGTTGTTTTAACCTTTTTTAGTGAGGGAAGTAAAGTATGGATCGTCATATCAATGCAGAGTGGTTTCATACAAAGCAATAAAagattcctttttttaaaaacaaagatttacaCATTATTGGAAATAGATATGCAGTCATTTTATTTCTGCTTTAGATATAGACAATTCTTGCTTTATTGTATGTACATCTTATCTATTAGGTCATATTCTTTTTGTATGAGTAATTCTCTGGTAATGCTTGATGTCCAAAATGCTCAAAATATGCTtagtttaaaagtcattttaattgaacaaaaGGTTTGTtcaaatgatgatgaaaataattaAGCAAATTGAAGTTCAAGCAAACTGTAATTAGAATGATTTTTTCTAACTGATAAACAATAAAAGCACTGCAATTTACATGACCaaagaaaatgaaaactgaaaaccAAACTAATAGCTAGGCAATAGTCAATGCATTGAAAATGACTCTTCTATAGCAACTCTACTAAGATCTCCTTATAAGTCTCATTCTGCATTTTCAGCGCTG
>TCONS_00015465
TTTGAGCTTGAAGAAGGACGGGGCAAACTTGACACAGGACTTGGGAAGGACTGACTTCGAGCTTGTGagctttttaaagaaatcagtggAGATCACTGAGAGCTGTGTGTGGTTGGGGGTGTGTTCCTGTGTATTTGGGCGAAAGCCATAGGAACTTTACTTCCATAGCGTGATCCTGCAGCTGCCAGTCAGTCATCAGTCGGAAGAATGCTAGAACATTGCCTCACATTTGGTCGCTCCCTTGTGAGGAGGAAGAATGTGGACCAGGGCTGTCTGGAGGAGTCCAAGCTGTGCCGCTGCCTCTCAACTGTTGATCTCATTGCTCTGGGGGTTGGAAGCACACTGGGGGCCGGTGTCTATGTACTCGCTGGTGAGGTGGCCAAAGGCAGTTCCGGCCCCAGCATCGTTGTGTCCTTCCTCATCGCTGCATTAGCATCTGTGATGGCTGGTTTGTGCTATGCTGAGTTTGGTGCCCGGGTACCCAAGACTGGCTCTGCCTATCTGTACAGCTATGTGACGGTAGGAGAGCTCTGGGCTTTCATCACCGGATGGAACCTCATTCTGTCATACGTCATCGGCACTTCCAGTGTGGCACGTGCCTGGAGTGGGACATTTGATGAGATTATAGGCGGTCACATTGAAAAATTCTGCAAAATGTACTTCAAAATGAGTTTGCCTGGCCTGGCGGAGTACCCTGATTTCTTTGCTGTTTGCCTGATCTTACTTCTGTCAGGCCTACTCTCCTTTGGGGTGAAGGAATCAGCCTGGGTCAACAAAATCTTCACAGCAGTAAATGTGCTTGTGCTCATGTTCGTTATCATCTCTGGATTTGTCAAAGGAGACTCTCTCAATTGGAACATATCAGAGGAATCGCTCGTAAATTACACAGTTGTCAAAAGAAACATCTCGAGTGCTGCTAATGTCACCAGCGATTATGGGGCAGGAGGCTTTTTTCCGTATGGATTTGGCGGAACGTTGGCTGGTGCGGCCACCTGCTTTTACGCCTTTGTGGGATTCGACTGTATTGCAACCACAGGTGAAGAGGTGAAGAATCCCCAGAGGGCCATTCCCATTGGCATAGTGGTTTCCCTTCTGGTCTGCTTCCTTGCCTACTTTGGTGTTTCAGCAGCCCTCACCCTCATGATGCCCTACTATCTGCTGGATGAGAAGAGTCCTCTACCTTTGGCTTTTGAGTATGTAGGCTGGGGGCCTGCAAAATATGTAGTTGCGGCAGGATCACTTTGTGCTCTTTCAACCAGCCTGTTGGGCTCAATGTTCCCCCTGCCCCGTATTCTGTTTGCCATGGCACGAGATGGCGTGCTATTCAGATTTCTTTCCAAACTGAGTAAGCGCCAGTCGCCAGTGGCTGCCACTATGGCAGCAGGCACTACCGCGGCTATCATGGCTTTTCTGTTCGACTTGAAAGCGCTGGTGGATATGATGTCTATTGGAACATTGCTGGCTTATTCCCTTGTGGCTGCTTGTGTTCTTATACTCAGATATCAGCCAGATGCTTCGTTCGAGAGGTCGAGGATCAGTGAAGGGAAGGAGGAGGTCGGAGAGTCTGAACTGACAGAGTCTGAGTCTCATCTGAACATGCTGAAGGATGGAGGAGTAACGCTGCGCTCTCTGCTCCATCCTCCACTGCTGCCCACTAAAAATACCTCCAGTGTGGTCAACGTGTCTGTCATCATCACAGTGCtggttgtgtgtgttgtgagcaCACTGAACACATACTACGGACAAGCCATTATTGCAATGGAGCTTTGGGCACTGGGAGTATTAGCTGCATCACTGTTCATCTTCATCATATGTGTCTTTCTTATTTGTAGACAACCACAAACAAGGAAGAAGGTTTCCTTTATGGTTCCTCTTTTGCCCTTTCTACCCATCTTGAGTATATTTGTCAATGTGTACCTCATGGTTCAGCTCAGCGGAGACACGTGGATCCGTTTCTCCATCTGGATGGCCATAGGTTTTCTCATCTATTTCGGCTATGGGATGTGGCACAGTGATGAACGCAAGCGACATCTACAGAACTGTGCTGTCGCAACAGAGAAAAAGACACTGACCGGAAATGAAGGCTTTGTGGAGAAcaagacacacacagagaagacCAGCCCATGCTAAAGAGCAGAAGACCAACTCTCACTTTAACTATAGCTGTTATTCACAGCGTTCCCCAGCCGGCTGACAGACGTAAGCTCTGTGCTTTCAGTCACTGCCGTCATGAACAATTACTGAAACACTTCTCACTGCTGATGTGAGTTTATAATGTAGTACAGTAGGTCATTAGGGGGGTACGATCTGACAAAACCAATGCTTCGATTATAGAAATGACCCTCAAAATAATGAAAATCAATATAAATTGTCATTTGACTTATATTCATGGTAGTTTCCGATAATAATGAATAGTGACCAAATGATTTTTGTATACTTGGATTTCTCATCGCAATATTTAGAACTTTTTAAATAGCATTGAAGGGCTGTCAAATATTTACAATCCCTTGAAGACAAACCTCAGCATGTGAGTGATTTGATTTCAGTGTTTGGATGAGAAAGGGAAAGCTTGTGCCTTTTTTTCATTACAAAAAAGTATTATGATTTCTGCAGTCAGTCTCTCAAGTTTacttttactgtgaaagtaaatataacaacagtaatattttactacagTATTCTTAGTTGGGAGAAATAAGTGTAAAATGATAAGTGTCCTTATCGAATGTGGGAtattaacactttaaaaaatatttgtaaatggaCAGTTTTCCCTATTTTGAGATTTATGTTTTTCCCctcttatttatgcttttgaattgcattattggaccTTAATTTTTACTTCAAAAGATTTGGATGAAAATTTGtccaaaaaaaagtcaataaaattcactttggtaaactgtagaatttaattttcaacataaaaagtgGACAGAGCTGAGATAAAActcacataatgcaattcacaaccgtaaataaacataaaacaacagatgaataattaacagatttttttcagtgcaaaTAATGGTCTAACTTTGATTTAGAATTAATTCTATTGACTACATCTTTCTGAATGTGCCAGAGATGTTAAGCTgctcagataaaaaaataataataatgttttcttgTATTAAACACTAGTTCCTTATTTTTACCCACGTTATTTGTGTTAGCATTGAATGTTTGACAGGACATTCTACTACAGTATTCATACAGTAGGTCAACCTGTTGTTTAACAACCATAAGGTTTGAAGACGTTAAAGAGGAGCAAGTAATCAGTGTTTTGTCTTGTACAGTTACGTTTATTCAATTTGATTTCTTTCTATATTTGTTTACTTCacagagacttttattttgtttttgatgaATAACAATCATTGGCTGTTGTCGTTTGAAAATTGACAATCTGTTTAATTCAGTTAATGATGGAAAGTGTTTCTTCTGCTAACTAATGGTCTTCTGTTGTGCCACTAATGCatgaatgtattattttgttttctctttAGAGCTTGTGTATAGTTGTTTTAACCTTTTTTAGTGAGGGAAGTAAAGTATGGATCGTCATATCAATGCAGAGTGGTTTCATACAAAGCAATAAAagattcctttttttaaaaa

Function

symbol description
slc7a2 Predicted to enable L-lysine transmembrane transporter activity; L-ornithine transmembrane transporter activity; and arginine transmembrane transporter activity. Predicted to be involved in L-arginine import across plasma membrane and L-ornithine transmembrane transport. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human SLC7A2 (solute carrier family 7 member 2).

GO:

id name namespace
GO:0097638 L-arginine import across plasma membrane biological_process
GO:0055085 transmembrane transport biological_process
GO:1903352 L-ornithine transmembrane transport biological_process
GO:0006865 amino acid transport biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0015171 amino acid transmembrane transporter activity molecular_function
GO:0015181 arginine transmembrane transporter activity molecular_function
GO:0015189 L-lysine transmembrane transporter activity molecular_function
GO:0000064 L-ornithine transmembrane transporter activity molecular_function
GO:0022857 transmembrane transporter activity molecular_function

KEGG:

id description
ko02000 Transporters

ZFIN:

id description
ZDB-GENE-041212-5 Predicted to enable L-lysine transmembrane transporter activity; L-ornithine transmembrane transporter activity; and arginine transmembrane transporter activity. Predicted to be involved in L-arginine import across plasma membrane and L-ornithine transmembrane transport. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human SLC7A2 (solute carrier family 7 member 2).

Ensembl:

ensembl_id ENSDARG00000037097

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00015464 False 3860 mRNA 0.40 11 30367602 30387894
TCONS_00015465 True 3627 mRNA 0.42 12 30368034 30390145

Neighbor

gene id symbol gene type direction distance location
XLOC_007926 pdgfrl coding downstream 1406 30359124 ~ 30366196 (-)
XLOC_007925 NA coding downstream 69431 30297374 ~ 30298171 (-)
XLOC_007924 fat1b coding downstream 140720 30156449 ~ 30226882 (-)
XLOC_007923 mtnr1ab coding downstream 226440 30105611 ~ 30141162 (-)
XLOC_007922 sorbs2b coding downstream 461393 29807097 ~ 29906209 (-)
XLOC_007928 zdhhc2 coding upstream 36811 30426956 ~ 30452218 (-)
XLOC_007929 micu3b coding upstream 63197 30453342 ~ 30490763 (-)
XLOC_007930 FP015860.1 coding upstream 121336 30511481 ~ 30536884 (-)
XLOC_007931 her11 coding upstream 148337 30538482 ~ 30540967 (-)
XLOC_007932 pfdn6 coding upstream 160252 30550397 ~ 30557637 (-)
XLOC_007641 CU855896.1 misc downstream 27959762 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 27960171 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 27960530 2406945 ~ 2407072 (-)
XLOC_007920 NA non-coding downstream 660559 29706704 ~ 29707043 (-)
XLOC_007919 NA non-coding downstream 665968 29701320 ~ 29701634 (-)
XLOC_007918 CABZ01048945.1 non-coding downstream 1014479 29353007 ~ 29353123 (-)
XLOC_007917 NA non-coding downstream 1452416 28911909 ~ 28915186 (-)
XLOC_007951 BX248522.1 non-coding upstream 936456 31326601 ~ 31326717 (-)
XLOC_007952 NA non-coding upstream 1076461 31466606 ~ 31469460 (-)
XLOC_007954 dre-mir-457b non-coding upstream 1131785 31521930 ~ 31522007 (-)
XLOC_007957 BX511227.4 non-coding upstream 1243001 31633146 ~ 31635433 (-)

Expression


Co-expression Network