CI01000016_08675783_08684401 (KCNJ14)


Basic Information

Item Value
gene id CI01000016_08675783_08684401
gene name KCNJ14
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 8673411 ~ 8684506 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_08675783_08684401.mRNA
GTATAAAATAAATCTGTTAGTGGAATTGTGACATTTTCTTGGAGATGAATAATCAGACATAATCAGCATATATTGAGCATGTTTTCATGTCATTATATTAGTTTTATCTTGCCTTTAAATTTCATATTAACTTTCATATCATGTTTTCTCTCTAGGAGTTAACAGATGTCCATGTGATGTCCTCAATGCAAAAACTGCAGACTCAGATAATAAGGAATGTGACAGGGGCCTGCCAGACTATTCTTGAGTTGTATTTGCTGTGGATATATTCTACCACAAATGTCAGTGTGAGGGCAGCAGATATTTGAAGATGAACCTAACCTCTCACTTTAGAAAAGTTCTTTTTCCACGCTCCAATTTGTTGATTCTCTTTTGAGTTTTTTTTTTTTTTCTCATTTCATCCTTTGATATATTTCTGTGCAAGTGGGCTTTTCGTGACTAGAAACCTTTTTTAAAGATTCTTTTTTCTATTATGTTCATTAAGCATCGAACTGCAGGTTTCTCAAAGGAGGTACATGAAAAGGTAACACCACTTATCAGGTCTGAACGTTTAGTTCCCCAATCACTTTATTTTGAAATCTATGAAGGTAATGGTTTGTGCTTCAGCTTACACTTATCTGGCCTATTGTTCACTTTTAGGGATATTTCAACAATTGCATGTGTTTTTTTGACGACCAAACTGGACTTGGACTCTGAGGAAGATCTCAAAGCATCACCTAGCATTTTTAAGCTTTTGGAGAGGCCAAAGTTCATCAGGTCATAATCTCACTCTAAACCTCTTCCCATTGTAATGTGTGGACTTTCTTTATCAAATATAATCCAGTAATTCAGTTATAGAACTTCAAGTTTTAGAGCAAAATGACCCTTTCTTTTGGAGAACTGGGCTCTTGCCTTGAGACTGGATGAAACCAGACTGAAGATGGATACATGACTGTGACAGAATGCCACTTGTGACTCTTTGAATGTCTAATAATATGATTGGGAAATGGACTTGCTTTGTGTTCCAGAGTTACATTTGCTCAATATCAAAGACAAAAGAGGTCACAACTGTGGAATTTTAGGAAATGTTGACCAGTTTTCATATTAATTGCATGTCTCTCTTGTGTCTTTAAACATCCATCCATTTAAATAAGGAAATGTGAAGAGGTCCTAGAGGGAAAATTGGTCTGTATATGCATGCTGTTATATTCATTTATTTCTTTATTTATTACACACATATGTTCTAGACTATTTTAATGCACGTCAAATATTTGTTCTTTTCAACTTCCCCTATATGTTCTAAAGCTTTGAGACTTGTTTATATTATATAAGTTCCATACTTTCCTTCTGCTTCTTTCTGCTCCGCTTGAGCTTCGCCTTGTTTGTTTGTGCCTTTTAGTTGCTCACTTTCTTATGTAGTTGCTATATGTTACGCATAGGCCTAAAGCAGCAGCGTTTTCCCAGTCTGGTCTCTGCCCACCAACTGACCTTGTCAAAACTGTTTCTAAAGCTGAAAAACTGCATTGAAACTGAAGTTTTTCTTTATTCACTGCATCTAACAACTTTGGAAATTTGTGTTCAGTAAAATCCAGGAATACTGGTTTACTGATATCTGACAGCTACCTATGGTGGACAGATTGCTCAAGTAGAGACTACATAAATCTTGAAAAGAGGGATGTCAGAGATGATCTCTAATGCGATTGTGTTCCGTCTCTGGGCAACTGTTGGCTGCCGGGATCTGAATGACAATAAGGACTATTTCAGGCCATAAGCCTTGCTGTGGAATACAATCAACGACTCATATATTGGATATATCTATATCACTGCAAACATTCTCACGAAAGCATCCCAATTTTTTAATCCACTTTGACCCTGGATTTATCTGGCAAACTCTTGAACGCTTCTTTTTTCCCAGACATTTTTTAGTCAGTCTGCCGTCGTCAGTAATGGGAGCTGCTCGGGTGAAGCGGCGCTTCAGTGCAGTTGTGGACACACCTCTGGATGAGGAGGAAGTCATGAGGCTGGCGCAAAGTGACGATGTCACTTCCTCCCATTCGGGCGTGCTTCCTTCTCCCAACTGCAATGGAAAAGTGCTCAACCTTCATCACAGCAATGGAGGAAGGAGTGGAGAGAGGGATGAGGATGATGATGTGAAGGATGATGATGATGATGATGATGATGAAGAAGGGGGAGGGAGGAGGGGGGGAGGAGGAGGAGGGCATGGCTCGGCACTCAAGGGGGAGTCTGGGGCAGAAGGGAGGTGGGAGAGGAACAAGAGAGCATCCTCGCCTTCCTTCTCGCCCTCGCCGCCCCGCGGTCGCCGTGGCCAGTCCCGCCGGCCCCGACGGCGCTTTGTAGGCAAGGACGGGCGCTGCAACGTCACCTTTGTCAACATGAGCGAAAGGGGCCAGCGCTACCTTACCGACCTCTTCACCACCTGCGTGGACATCCGCTGGCGCTGGATGCTCGTGGTGTTCACCCTCTCCTTCTTGCTCTCCTGGCTTCTCTTTGGTTTCACGTTCTGGCTCATCGCCGCCGCTCACGGGGATCTGGCTGCTCCCCTGGCATCATCTTCCTCTTCTCCTTCGTCTGTTTCCTCCTCTCTTGCTCCTCTGCAAGCTGCCGGGGTTTCTGGCCCGGTGGAGATGGAGGAACGCTGCTTTCAGCAGGTGAACAGCTTCATGGCAGCGTTCCTCTTCTCTCTAGAGACGCAGACATCTATAGGCTACGGCTTCCGGAGCGTTACCGAGGCCTGCCCCCTGGCGGTGCTTGCTGTCGTGTTGCAGTGCATTGTGGGCTGCATCATCGACGCTTTCATCATTGGGGCGGTAATGGCTAAGATCGCCAAGCCCAAGAAGCGCAATGAGACACTGGCGTTCTCGGATGTGGCCGTGGTGGCTATGAGGGACGGGAAACTCTGCATGATGTGGCGAGTGGGAAACTTGCGCAAGAGCCACCTGGTGGAGGCCCATGTACGAGCACAGCTACTGAAGCCACGGGTGACCCCTGAGGGTGAGTTCCTGCCATTGGACAATGCAGACCTCAATGTTGGCTTTGACACAGGAACAGATCGGATCTTTTTGGTGTCACCTGTGACCATCGTGCATGAAATTGATGAGGAGAGCCCTTTCTTTGAGGTGGACAAACGTACACTAGAGGGAGACAAAGAGCTGGAAGTGGTGGTGATTCTGGAGGGCATGGTGGAGGCCACTGCCATGACAACCCAATGCCGCTCTTCATACCTGGCCTCTGAGATCCTCTGGGGTCACCGCTTTGAACCTGTGCTCTTTGAAAGGAAGAACTGCTACCAGGTGGACTACTCGTACTTCAACAGGACTTATGAGGTCACGGACACGCCCACTTGCAGCGCTAAAGAACTAGCAGAGAAAAAGTACATCCTGGGCTCCCGTTCCTCCTTCTGTTACGAGAACGAGTGGATTCCCCCAAAAAGTAGGAGCTTTGTAGAGAGGGAACTTTCAGATGGAGCCAGGCAGGAGGAGGCTAAAGTTTGAGTTGTTAAAGTTTGAGTCAGAGTGCCGGGGAATGTATTCAGGTCAATCAGATTGAAATGAGGTCAAAGACTTAATGACCGAAAACAGATCGACCTGGTGGTGAAA

Function

symbol description
kcnj14 Enables inward rectifier potassium channel activity. Acts upstream of or within camera-type eye development. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in atrium and cardiac ventricle. Orthologous to human KCNJ14 (potassium inwardly rectifying channel subfamily J member 14).

NR:

description
Unknown (protein for IMAGE:7064374), partial

GO:

id name namespace
GO:0006810 transport biological_process

KEGG:

id description
K05007 KCNJ14, KIR2.4; potassium inwardly-rectifying channel subfamily J member 14

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_08675783_08684401.mRNA True 3596 mRNA 0.45 4 8673411 8684506

Neighbor

gene id symbol gene type direction distance location
CI01000016_08628196_08630801 NA coding upstream 42033 8628196 ~ 8631378 (+)
CI01000016_08553934_08565167 DFNA5 coding upstream 108165 8552843 ~ 8565246 (+)
CI01000016_08513514_08545976 OSBPL3B, OSBPL3 coding upstream 127274 8513514 ~ 8546137 (+)
CI01000016_08450823_08453343 NA coding upstream 220034 8450628 ~ 8453377 (+)
CI01000016_08390421_08396972 NA coding upstream 275656 8390289 ~ 8397755 (+)
CI01000016_08696516_08734418 MYH14 coding downstream 12010 8696516 ~ 8734660 (+)
CI01000016_08748359_08750572 NA coding downstream 63853 8748359 ~ 8750736 (+)
CI01000016_08752386_08753821 RPL18.L, RPL18.S, RPL18 coding downstream 67880 8752386 ~ 8753821 (+)
CI01000016_08766170_08768621 LAG3 coding downstream 81664 8766170 ~ 8768778 (+)
CI01000016_08817749_08824067 NA coding downstream 133243 8817749 ~ 8824078 (+)
G98294 NA non-coding upstream 17278 8655762 ~ 8656133 (+)
G98231 NA non-coding upstream 30433 8642761 ~ 8642978 (+)
G98230 NA non-coding upstream 31001 8642188 ~ 8642410 (+)
G98106 NA non-coding upstream 38981 8632923 ~ 8634430 (+)
G98225 NA non-coding upstream 54557 8618536 ~ 8618854 (+)
G98315 NA non-coding downstream 78207 8762713 ~ 8762969 (+)
G98320 NA non-coding downstream 94037 8778543 ~ 8778763 (+)
G98321 NA non-coding downstream 96061 8780567 ~ 8780906 (+)
G98256 NA non-coding downstream 99107 8783613 ~ 8800681 (+)
G98317 NA non-coding downstream 131130 8815636 ~ 8816240 (+)
G97824 NA other upstream 657636 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 887688 7783987 ~ 7784996 (+)
G96389 NA other upstream 1512121 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 3265548 5405791 ~ 5407963 (+)
G95792 NA other upstream 3447470 5219880 ~ 5225941 (+)
G98288 NA other downstream 311592 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 1111125 9795950 ~ 9842576 (+)
G99041 NA other downstream 1239912 9924418 ~ 9925654 (+)
G99410 NA other downstream 1549894 10234400 ~ 10236851 (+)
G99456 NA other downstream 1609885 10294391 ~ 10298904 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location