CI01000016_08817749_08824067


Basic Information

Item Value
gene id CI01000016_08817749_08824067
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 8817749 ~ 8824078 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_08817749_08824067.mRNA
ATGAGGATAGAGAGCAAGCTGGAGATCTCCAAAAGTAAGATGTTTGCCCTGCTCAGTGTCCTTCTGCTTTCGTCACACGTCCTTCCTCTCGTCCAATCACAGACGTGCAATGAAACAACAGAGTACCCTAAAGTCAATCAGTGCTGCAAAAAATGTGAACCAGGACAGTTTCTGGAAAAGAGATGCGAAACCGGCTCACCTGATTCTCAGTGTAGGCCTTGCGGAAAAGGCTACTTCATGGAAGAATATAATACCAATTTCGGCTGGTGCAAACATTGCACAAAGTGCAACAAAGATCATATGAAGTATAAGAGGAACTGTACGGCGACAAAAGATGCCGAGTGTACATGTGATGAAGGCTACAGATGCAAAGACGATTGCATGATGTGTGTAAAAGAACAGACAACTACTCCTGTTACTTTCCATCCTCCTTCTGCTACTAAAACACCACAGGATAATGTGTGGATCTCGCAGACATGCACGATCATGTGGAAGGATCATGTCAGCATCAAAGGGTCAGTGCCACTATAAAAAATGCTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_08817749_08824067.mRNA True 542 mRNA 0.44 6 8817749 8824078

Neighbor

gene id symbol gene type direction distance location
CI01000016_08766170_08768621 LAG3 coding upstream 48971 8766170 ~ 8768778 (+)
CI01000016_08752386_08753821 RPL18.L, RPL18.S, RPL18 coding upstream 63928 8752386 ~ 8753821 (+)
CI01000016_08748359_08750572 NA coding upstream 67013 8748359 ~ 8750736 (+)
CI01000016_08696516_08734418 MYH14 coding upstream 83089 8696516 ~ 8734660 (+)
CI01000016_08675783_08684401 KCNJ14 coding upstream 133243 8673411 ~ 8684506 (+)
CI01000016_08916022_08916606 NA coding downstream 90950 8915028 ~ 8916667 (+)
CI01000016_09026732_09050431 NA coding downstream 202654 9026732 ~ 9050838 (+)
CI01000016_09138227_09156795 NA coding downstream 313356 9137434 ~ 9157472 (+)
CI01000016_09181426_09182326 NA coding downstream 357348 9181426 ~ 9182326 (+)
CI01000016_09183871_09184200 TMEM238 coding downstream 359298 9183376 ~ 9184427 (+)
G98318 NA non-coding upstream 767 8816414 ~ 8816982 (+)
G98317 NA non-coding upstream 1509 8815636 ~ 8816240 (+)
G98256 NA non-coding upstream 17068 8783613 ~ 8800681 (+)
G98321 NA non-coding upstream 36843 8780567 ~ 8780906 (+)
G98320 NA non-coding upstream 38986 8778543 ~ 8778763 (+)
G98326 NA non-coding downstream 21576 8845654 ~ 8847124 (+)
G98241 NA non-coding downstream 56931 8881009 ~ 8912783 (+)
G98272 NA non-coding downstream 65764 8889842 ~ 8894794 (+)
G98289 NA non-coding downstream 119139 8943217 ~ 8945455 (+)
G98356 NA non-coding downstream 154154 8978232 ~ 8978540 (+)
G97824 NA other upstream 801974 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 1032026 7783987 ~ 7784996 (+)
G96389 NA other upstream 1656459 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 3409886 5405791 ~ 5407963 (+)
G95792 NA other upstream 3591808 5219880 ~ 5225941 (+)
G98288 NA other downstream 172020 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 971553 9795950 ~ 9842576 (+)
G99041 NA other downstream 1100340 9924418 ~ 9925654 (+)
G99410 NA other downstream 1410322 10234400 ~ 10236851 (+)
G99456 NA other downstream 1470313 10294391 ~ 10298904 (+)

Expression


Co-expression Network