CI01000016_08833925_08836497


Basic Information

Item Value
gene id CI01000016_08833925_08836497
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 8833490 ~ 8836497 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_08833925_08836497.mRNA
ATGCTTGTGACAATGTTATCTGTAGCCATGGTGATGCTGACAGGTCACCATATATACGGCCACCCTGTGCAGGATGGAAATGCGAGAGATCCCAATTCCCCTTTGTGTCAAGCAGGAGATTACCTGCCAGACAATTCCAAAAACTGTGTTCGTTGCGACTCTGGTTTCTTCACCAATCAGGAGAACAGAGAAAGCAATTGCCACCGCTGTTTCCAGAACTGCAATGCTGGTATGAAGCTCTTTACACCTAATTTACCCATGATAGTATAAACAAGATGAAGTGAGAATAGAAACAGGAAGTATGGCAAAAAGTGCTTCATTTTGAAAACACGTTTGTCTGTGTGTGTGTGTGTGTGTGTTTTAGATTTCTATATGGAGGTGGAAAAGGAGTGTACGCATAAATCAGATGTAGTCTGTCGCTGTCAGAAGGGATATGAATGTACCACGGAGGACCAATACACAGGCCAATGTCGGGAATGTGTTCCTGTCACCACCCCAAGCTCATCCTTCACCCCTGCTGACACCCCTTCATCCACCAATTCATCTACCACTTCACCCATAAGTGCACAGAGCTTTCTGGGTAAGCATGGCTTTTTTCTTCTACATCAGGGTTTCCCAAACGGGGATTTGTGAGGGAACTGCAGGGGGTTCGTGAGTTGATGAAAAACGAATAATTAATTATATTGAATGTTTAAAGAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_08833925_08836497.mRNA True 705 mRNA 0.44 3 8833490 8836497

Neighbor

gene id symbol gene type direction distance location
CI01000016_08800360_08805384 NA coding downstream 28106 8798407 ~ 8805384 (-)
CI01000016_08769141_08795202 NA coding downstream 37931 8768822 ~ 8795559 (-)
CI01000016_08741387_08746007 NA coding downstream 87424 8740982 ~ 8746066 (-)
CI01000016_08642218_08643021 NA coding downstream 190469 8641441 ~ 8643021 (-)
CI01000016_08605369_08623062 STK31 coding downstream 210428 8605247 ~ 8623062 (-)
CI01000016_08851218_08869647 IFFO1B coding upstream 14375 8850872 ~ 8869647 (-)
CI01000016_08871984_08874796 OPN9 coding upstream 35487 8871984 ~ 8874796 (-)
CI01000016_08881761_08888177 GAPDH coding upstream 45054 8881551 ~ 8888237 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 coding upstream 56101 8888833 ~ 8894737 (-)
CI01000016_08906943_08914821 NOP2 coding upstream 70115 8906612 ~ 8914940 (-)
G98709 NA non-coding downstream 16601 8816414 ~ 8816889 (-)
G98708 NA non-coding downstream 17789 8814845 ~ 8815701 (-)
G98714 NA non-coding downstream 22258 8810429 ~ 8811232 (-)
G98713 NA non-coding downstream 24498 8808550 ~ 8808992 (-)
G98711 NA non-coding downstream 54896 8778362 ~ 8778594 (-)
G98715 NA non-coding upstream 34778 8871275 ~ 8871516 (-)
G98672 NA non-coding upstream 79425 8915922 ~ 8916673 (-)
G98658 NA non-coding upstream 88013 8924510 ~ 8925768 (-)
G98694 NA non-coding upstream 221315 9057812 ~ 9058118 (-)
G98776 NA non-coding upstream 265104 9101601 ~ 9101813 (-)
G97341 NA other downstream 2673769 6158986 ~ 6159721 (-)
CI01000016_05412782_05415867 NA other downstream 3415273 5412248 ~ 5415906 (-)
CI01000016_05325805_05330265 COX6B2 other downstream 3502644 5325519 ~ 5332874 (-)
CI01000016_04921091_04922518 NA other downstream 3910086 4918975 ~ 4922518 (-)
CI01000016_03921124_03930996 NA other downstream 4902439 3920055 ~ 3931162 (-)
CI01000016_08926089_08945071 NA other upstream 100292 8925960 ~ 8945229 (-)
G98679 NA other upstream 398499 9234996 ~ 9239929 (-)
G98691 NA other upstream 419605 9256102 ~ 9257611 (-)
CI01000016_09510177_09512196 ID4 other upstream 673125 9509622 ~ 9512428 (-)

Expression


Co-expression Network