CI01000016_08916022_08916606


Basic Information

Item Value
gene id CI01000016_08916022_08916606
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 8915028 ~ 8916667 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_08916022_08916606.mRNA
GTATTAAAATAGATGTCTGGCTTGTAATCGTGACAAATACAACTTTTACTTGGATAACTGGCAGTTTGATTGTCAGATAGGAGCGTGATGCGGCTTCCACAATTTAACACATGCTAACATTCATAAGGTTAATAATATGCAGGCCCATTGTGTTTATAATACTGCAGTAAATTCAATACCATGTTTAGATGGAATTCATTAGGTTGTATTCTGCGCACCATTTACTAGCACGCTGCAAACCATGAGACTAGCTTACAAGCGATTAACACAAAAAATTGTAACTGTAAACCCAACAGATACTTACTGTTTAACAAAAACAAGTTCTTACGATTACCCCGATCTTCTCTCGAACACTCCGAGAAATTTTAGTTTTAATTTACTAAAGTTGCCAGAGTACATGTGCCTCTCTCATGCTGCCGTGAACTAGCGCACATGTGACTTCAGCTGCACACGTTGGATTTCCGGAAGTTGTTAGCGATGCCCGATTGGTGAACGATTCATTCTTCGGAGTCGGATCTTTTCTAAATCCGTTGATTTTTTTTCTCAGTATTTTTAATTTTTAATTTACTTTAATAGCCGAACAACACAAACACAAACGTGTTTGTTTTTTTATTCATTTAAATATGAAAAAACGTTTCTAGCCAAAAGTACTGACTGATGAAAATGTTCAGAATGTCCAAGCTGAATTATGGTTGCAACAGACTGAAGTGGGACACATGAACGTACAATGAAGATTTTTATTTAAAAACTTTAAACCAGCAGCGAGTGGGTTTTGACGTAAAAGATGAATCGTTTTTGAACCGGTTCTTTAAACCGAACTGTTTGAAAGAACCGATTCGCGTAAATGAATCAGACACCGGATTACTACTTCCGTCGCGCACATTCTGCGAAAGCAATTCGCTACTTGAAGTTGTCGGAGAGCTTCAACTTTCGTAAATTAAAACTAAAATTTCTCGGAATTTGCATGAATACAACTACCCCTTCAGTCACTGCCATGGAGGACGAATGGGAGGAGGAGGAGCAGTTGGTTGTGGCGGAACTGTCTGGAATGATCAGCTCTGATCTACTCTCCAGTCGGCAGAGCACCTGTAAGATAGTGGACATTGACAGCGAGCAGCCCATGATGCAGGTGGGCCGGTATCTGTTCGCTGGAGAATACGAGGACGCCATCGGAACATGTGTGATTTTCGAAGAAGATGGTGCAGACTCTAAACCAGCCCTTAAATACAAATGTCACACCATGAAGAAACTGATGCTGCAGCGGACGTTTCTGTCCGAGAGGAAAGAGGACGAGCCCGTCTCTAACCGAATAGAGGTACTGGCTCTCCACGATGAAGAGTCGTTCGGCCGGAAGAGTGCAGTTTGTCACTACCTGGATCCGATAGACACAGAGAAATCGGTGCTAGATGAACCTAAAGATTGCGATGATCCAGAGATGAGCGACGAATCGGCGGATGAAATGGAAGAGACTGAGACTGACGCGGGAGCCACGCTTTTGGACAACTCCACTGAGGAGACGATGAACGCCAGCAGCTCTTCTGTACTGACTGCTATACAAGAAGGGGACGATGGCTCTTGAAAGACTGCTTGATTTCTGAGGATGTACAGACTGCGTCGTGTAAATATATGCTTTCTGGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_08916022_08916606.mRNA True 1640 mRNA 0.43 1 8915028 8916667

Neighbor

gene id symbol gene type direction distance location
CI01000016_08817749_08824067 NA coding upstream 90950 8817749 ~ 8824078 (+)
CI01000016_08766170_08768621 LAG3 coding upstream 146250 8766170 ~ 8768778 (+)
CI01000016_08752386_08753821 RPL18.L, RPL18.S, RPL18 coding upstream 161207 8752386 ~ 8753821 (+)
CI01000016_08748359_08750572 NA coding upstream 164292 8748359 ~ 8750736 (+)
CI01000016_08696516_08734418 MYH14 coding upstream 180368 8696516 ~ 8734660 (+)
CI01000016_09026732_09050431 NA coding downstream 110065 9026732 ~ 9050838 (+)
CI01000016_09138227_09156795 NA coding downstream 220767 9137434 ~ 9157472 (+)
CI01000016_09181426_09182326 NA coding downstream 264759 9181426 ~ 9182326 (+)
CI01000016_09183871_09184200 TMEM238 coding downstream 266709 9183376 ~ 9184427 (+)
CI01000016_09228083_09231481 NA coding downstream 311416 9228083 ~ 9231635 (+)
G98241 NA non-coding upstream 2245 8881009 ~ 8912783 (+)
G98272 NA non-coding upstream 20234 8889842 ~ 8894794 (+)
G98326 NA non-coding upstream 67904 8845654 ~ 8847124 (+)
G98318 NA non-coding upstream 98046 8816414 ~ 8816982 (+)
G98317 NA non-coding upstream 98788 8815636 ~ 8816240 (+)
G98289 NA non-coding downstream 26550 8943217 ~ 8945455 (+)
G98356 NA non-coding downstream 61565 8978232 ~ 8978540 (+)
G98362 NA non-coding downstream 72571 8989238 ~ 8989461 (+)
G98375 NA non-coding downstream 168561 9085228 ~ 9098103 (+)
G98385 NA non-coding downstream 209052 9125719 ~ 9125931 (+)
G97824 NA other upstream 899253 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 1129305 7783987 ~ 7784996 (+)
G96389 NA other upstream 1753738 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 3507165 5405791 ~ 5407963 (+)
G95792 NA other upstream 3689087 5219880 ~ 5225941 (+)
G98288 NA other downstream 79431 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 878964 9795950 ~ 9842576 (+)
G99041 NA other downstream 1007751 9924418 ~ 9925654 (+)
G99410 NA other downstream 1317733 10234400 ~ 10236851 (+)
G99456 NA other downstream 1377724 10294391 ~ 10298904 (+)

Expression


Co-expression Network