CI01000016_09181426_09182326


Basic Information

Item Value
gene id CI01000016_09181426_09182326
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9181426 ~ 9182326 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_09181426_09182326.mRNA
AAGTTATGATTGCACACATTATAACACCCATATCGCACATCCAAGGACAATGCACGAGGATACTCCTGCCATGTGTTCTGTTATTTTTGATCGTAGGAGTTGTGACGGGACAGCGCAGTGTGAGCAACAAAGGGGATTGTTCTAAAAATGAATACTGGAGCGACGGGCTCTGCTGTGACAAATGTGCTCCAGGGCATAAGTTGATAAAGAAATGCTCTAGTGGAATGCAATCTGAATGTGTGAAATGTTCAGATGGGACGTACCAAGACAGTATGAATTATTTCCCCAACTGCTTTAGATGCCAGAAATGCACCAAACGTCATGCAGTGGAGATTTCACCATGTACATACCAAAATAACACAGTTTGTGGATGTCAGCCTGGATACCGCAAAAGATCCTTAGATGGGAATTTATTATTCAGTATTTCATGGGATTGTGTGCGCTTAAAAAGGACTCAAATCCATAAAGTTAATTCGCTGGATCACACAG

Function

NR:

description
tumor necrosis factor receptor 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_09181426_09182326.mRNA True 489 mRNA 0.42 4 9181426 9182326

Neighbor

gene id symbol gene type direction distance location
CI01000016_09138227_09156795 NA coding upstream 23954 9137434 ~ 9157472 (+)
CI01000016_09026732_09050431 NA coding upstream 130588 9026732 ~ 9050838 (+)
CI01000016_08916022_08916606 NA coding upstream 264759 8915028 ~ 8916667 (+)
CI01000016_08817749_08824067 NA coding upstream 357348 8817749 ~ 8824078 (+)
CI01000016_08766170_08768621 LAG3 coding upstream 412648 8766170 ~ 8768778 (+)
CI01000016_09183871_09184200 TMEM238 coding downstream 1050 9183376 ~ 9184427 (+)
CI01000016_09228083_09231481 NA coding downstream 45757 9228083 ~ 9231635 (+)
CI01000016_09240403_09243601 NA coding downstream 57419 9239745 ~ 9243601 (+)
CI01000016_09259876_09260073 NA coding downstream 77315 9259641 ~ 9260201 (+)
CI01000016_09266373_09278553 NA coding downstream 83239 9265565 ~ 9279131 (+)
G98391 NA non-coding upstream 5466 9175199 ~ 9175960 (+)
G98385 NA non-coding upstream 55495 9125719 ~ 9125931 (+)
G98375 NA non-coding upstream 83323 9085228 ~ 9098103 (+)
G98362 NA non-coding upstream 191965 8989238 ~ 8989461 (+)
G98356 NA non-coding upstream 202886 8978232 ~ 8978540 (+)
G98392 NA non-coding downstream 29024 9211350 ~ 9211766 (+)
G98280 NA non-coding downstream 42123 9224449 ~ 9226908 (+)
G98290 NA non-coding downstream 144048 9326374 ~ 9375553 (+)
G98271 NA non-coding downstream 193891 9376217 ~ 9378050 (+)
G98409 NA non-coding downstream 217629 9399955 ~ 9402046 (+)
G98288 NA other upstream 178709 8996098 ~ 9002717 (+)
G97824 NA other upstream 1165651 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 1395703 7783987 ~ 7784996 (+)
G96389 NA other upstream 2020136 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 3773563 5405791 ~ 5407963 (+)
CI01000016_09796196_09842235 NA other downstream 613305 9795950 ~ 9842576 (+)
G99041 NA other downstream 742092 9924418 ~ 9925654 (+)
G99410 NA other downstream 1052074 10234400 ~ 10236851 (+)
G99456 NA other downstream 1112065 10294391 ~ 10298904 (+)
G99940 NA other downstream 2489319 11671645 ~ 11672873 (+)

Expression


Co-expression Network