CI01000016_09212039_09212358


Basic Information

Item Value
gene id CI01000016_09212039_09212358
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9211997 ~ 9213170 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_09212039_09212358.mRNA
AAAATAAAGAGACTCTTAAGGAACCAGAGAAAAAAACTACAGAAAACATCACATGAAAACAAGATTCACAAGGAAAGGTAAGATCTTTATTTGCTCTTATTAAGTCTTATATTTCCTTTTTATGTCTGAATATGTCTAAAATTGTGAATCCATTTGATAGTGTGTCAGGGGAAAAGATAAAAAAAAGTTATATAATGATAAATGATTTAAGTAATACTGTATAAAGGATCTAAAGCAATTTAACTACAGTATTAATAATATAGTTTTACTGTAAAATAATGTATTTTTAAAAAGTATTTTTGCTGACTGTTCAATAAAATGTAACTGTAAATGTAATATAAATTTGATTATTACTATATTTTGAGAGAGATGAAAGAACCAGACAGTTAAAATATATTGTTTTTCATCTTCATACATGAATGAGCAAAAGTATTGTGATTCTATATAGAACCTTCAAGGGTTCCGTCAGGAGCTTCATATATAGAACCCTTTTAGAGGTTTCCATCATGGAATCAGATTTAGTTTTAATTAATTAATCGACGCATTTTTAGTTTTACTTACATTTCATTAATTAAGCAGCTTTAAACATACTTTATCACTAGAAAAAAATCAAATAACCTGTTAATCGTGTAAGTATTATGGAATCATTTGAGACATTTCTCCTTATTTAGAATCTTTTTGGCATAAAGTGTTCTTTAAAATTGAGTCAAGAACGCTAGAACCTTTTTTTCTAAGAGTGTACAAACGTATTGTTCACATCAAATTATTTTTTAATAAAGACTTAATAATAAGTATTGTTATTATTTTTACAGATGGGTTCAAATGTCCTCACCGGTCATATACTGCTGATTGCAGCCTTTCTGCTGAGCGCATTTGCTCCAACTCTCTCTGTGAACCGAGGTGGAGAGTGCACATTCAACACCAAAGGCACCTGTGAATATGAAGACCAGGTCTTCGGCATTGGTGAGAGTTGGATTACTAACGACTGCTACCAGTGCGTGTGTATGGAGCCTTTTGGAGTGGGCTGCTGTGATTAGTATGTACTGCTAAGTTCTTTTTTAAATCCTTATTGTAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_09212039_09212358.mRNA True 1079 mRNA 0.31 2 9211997 9213170

Neighbor

gene id symbol gene type direction distance location
CI01000016_09185530_09205841 NA coding downstream 5963 9185404 ~ 9206034 (-)
CI01000016_09164404_09171973 CCDC106A, CCDC106 coding downstream 37239 9164404 ~ 9174758 (-)
CI01000016_09129190_09132103 NA coding downstream 79894 9127608 ~ 9132103 (-)
CI01000016_09107780_09122244 CASP2 coding downstream 89707 9107409 ~ 9122290 (-)
CI01000016_09060801_09086358 CLCN1B coding downstream 123798 9060522 ~ 9088199 (-)
CI01000016_09224593_09226660 NA coding upstream 11297 9224467 ~ 9226660 (-)
CI01000016_09251602_09253351 NA coding upstream 38242 9251412 ~ 9253351 (-)
CI01000016_09376209_09382250 TAPBPL coding upstream 163039 9376209 ~ 9382250 (-)
CI01000016_09384358_09401878 GRHL2A coding upstream 170992 9384162 ~ 9401878 (-)
CI01000016_09410080_09416286 NCALDA, NCALDB, HPCAL1, NCALD.L, NCALD coding upstream 196736 9409906 ~ 9417767 (-)
G98783 NA non-coding downstream 36080 9175182 ~ 9175917 (-)
G98666 NA non-coding downstream 53725 9156669 ~ 9158272 (-)
G98675 NA non-coding downstream 104771 9105394 ~ 9107226 (-)
G98778 NA non-coding downstream 108539 9103223 ~ 9103458 (-)
G98776 NA non-coding downstream 110184 9101601 ~ 9101813 (-)
G98683 NA non-coding upstream 20734 9233904 ~ 9234433 (-)
G98692 NA non-coding upstream 41781 9254951 ~ 9255328 (-)
G98789 NA non-coding upstream 42465 9255635 ~ 9255882 (-)
G98831 NA non-coding upstream 97821 9310991 ~ 9311210 (-)
G98834 NA non-coding upstream 100405 9313575 ~ 9314005 (-)
CI01000016_08926089_08945071 NA other downstream 266768 8925960 ~ 8945229 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other downstream 317260 8888833 ~ 8894737 (-)
G97341 NA other downstream 3052276 6158986 ~ 6159721 (-)
CI01000016_05412782_05415867 NA other downstream 3793780 5412248 ~ 5415906 (-)
CI01000016_05325805_05330265 COX6B2 other downstream 3881151 5325519 ~ 5332874 (-)
G98679 NA other upstream 21826 9234996 ~ 9239929 (-)
G98691 NA other upstream 42932 9256102 ~ 9257611 (-)
CI01000016_09510177_09512196 ID4 other upstream 296452 9509622 ~ 9512428 (-)
G99178 NA other upstream 601191 9814361 ~ 9814955 (-)
G100190 NA other upstream 837998 10051168 ~ 10052389 (-)

Expression


Co-expression Network