CI01000016_09224593_09226660


Basic Information

Item Value
gene id CI01000016_09224593_09226660
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9224467 ~ 9226660 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_09224593_09226660.mRNA
ATGAAGTTTCCTGCCATGCTCTTGGGTTTTGTCTTGGTGTGTAGTCTGGGCATCGCTGGCTACATCCATACCAGACGGAAGCAGGAACTGCAACTGAATAAACAGGCTTCATTTCTAGATATTAAGTTCAGAGTGACCAGGGATGTTCTGGGAGAATACCAAGATCAGCTGATCCAGTCCAACGCACAGATAGAAAATACCAAGAAAGAGATGGATACTCTAACCAAAGACCTGTCCCAAGTTAAGACCGTAGTAGAGCAGAAAAAGAGTGACGCTGCTGCCTGTAATGGAGACAAGAAACGATTCACAGATGAAATTGCTGCTTCAGAGACAGAGAAGAAACATATCCAGGATGAGATGGTCAAGGAAAAGTCCCAATGGGAAACTGAGGTTGCTTCTCTTAAAAAACAACTGGAGCAGCAGAGCACACTTTGCAAGTACATCGACAAGACCTCCGAGGAAGGAAAGAAACTGTGTAACATAATTGACGAGCCACAAAAGCCAGAGGCAAAGCCCAATGAACCAGCAGCAAATGAAGCCAAAGCTGAACAACCGAAACCTGAGGGGAAAAAAGCTGAAGCGCCAAATGCCGAAGCGCCAAATGCCGAACAGCCAAAAGCTCAAGCGTACATGCCCGCTTGTATCGACCAATGGGAAAGCTCTGACCCTCTTACTGTCGCTCCTAATTATCCTCGCTCTATTACCCCACTTACTATCTTTATGTAGTCCTGACAACAACAAGCTTAACCAATCAGAGCCTTCAGTGGAGCAGTTATGAGTTGCTCTTCAGTGTCCTTTGTTATAGGTTTTGGTTTTATGCTGAAATATTGTGATGTTTGATGTAAAAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_09224593_09226660.mRNA True 852 mRNA 0.44 5 9224467 9226660

Neighbor

gene id symbol gene type direction distance location
CI01000016_09212039_09212358 NA coding downstream 11297 9211997 ~ 9213170 (-)
CI01000016_09185530_09205841 NA coding downstream 18433 9185404 ~ 9206034 (-)
CI01000016_09164404_09171973 CCDC106A, CCDC106 coding downstream 49709 9164404 ~ 9174758 (-)
CI01000016_09129190_09132103 NA coding downstream 92364 9127608 ~ 9132103 (-)
CI01000016_09107780_09122244 CASP2 coding downstream 102177 9107409 ~ 9122290 (-)
CI01000016_09251602_09253351 NA coding upstream 24752 9251412 ~ 9253351 (-)
CI01000016_09376209_09382250 TAPBPL coding upstream 149549 9376209 ~ 9382250 (-)
CI01000016_09384358_09401878 GRHL2A coding upstream 157502 9384162 ~ 9401878 (-)
CI01000016_09410080_09416286 NCALDA, NCALDB, HPCAL1, NCALD.L, NCALD coding upstream 183246 9409906 ~ 9417767 (-)
CI01000016_09475913_09487996 NA coding upstream 248337 9474997 ~ 9488292 (-)
G98783 NA non-coding downstream 48550 9175182 ~ 9175917 (-)
G98666 NA non-coding downstream 66195 9156669 ~ 9158272 (-)
G98675 NA non-coding downstream 117241 9105394 ~ 9107226 (-)
G98778 NA non-coding downstream 121009 9103223 ~ 9103458 (-)
G98776 NA non-coding downstream 122654 9101601 ~ 9101813 (-)
G98683 NA non-coding upstream 7244 9233904 ~ 9234433 (-)
G98692 NA non-coding upstream 28291 9254951 ~ 9255328 (-)
G98789 NA non-coding upstream 28975 9255635 ~ 9255882 (-)
G98831 NA non-coding upstream 84331 9310991 ~ 9311210 (-)
G98834 NA non-coding upstream 86915 9313575 ~ 9314005 (-)
CI01000016_08926089_08945071 NA other downstream 279238 8925960 ~ 8945229 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other downstream 329730 8888833 ~ 8894737 (-)
G97341 NA other downstream 3064746 6158986 ~ 6159721 (-)
CI01000016_05412782_05415867 NA other downstream 3806250 5412248 ~ 5415906 (-)
CI01000016_05325805_05330265 COX6B2 other downstream 3893621 5325519 ~ 5332874 (-)
G98679 NA other upstream 8336 9234996 ~ 9239929 (-)
G98691 NA other upstream 29442 9256102 ~ 9257611 (-)
CI01000016_09510177_09512196 ID4 other upstream 282962 9509622 ~ 9512428 (-)
G99178 NA other upstream 587701 9814361 ~ 9814955 (-)
G100190 NA other upstream 824508 10051168 ~ 10052389 (-)

Expression


Co-expression Network