CI01000016_09259876_09260073


Basic Information

Item Value
gene id CI01000016_09259876_09260073
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9259641 ~ 9260201 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_09259876_09260073.mRNA
GTATATTATTAAGCTCATGTTAATTGATGTACATTAAATGTTTTTTGGATTATGGCAGTAAACTCACCCTCAGTTTTCATCTCTTTCCCATTATTCTCCAGCTACCTCTTCAGTGGTGACACAGAGTTCTCTTTGGGACTAACTGGAGTTTGGTAGACATTAGTGCTCCTGTCAGACACAAACCTGAAGTTTGGATGACATTGATGCTCCAATCCAACATGGTATGGACTGGAGAATGGCTGGCATTGATGTTTCAGTCGGAAGAGGTGCGATGGACTGGAGTCTGGGTGACATTGACACTCCGGTTGGATGCAGTGCAATGTATTGGAGTCAGGGTGACAGAAATCTGGGTGATGTCAGCACACCAGACAGATGTGGCATGGACTGGATTCTGGACATCAACATTGCTCCAGTTCGATGCAGTGTTGACTAAAGGCAGGCCAGCAATGACATTCTAGATGGTTCTAATAATGGCACCTCTGTGCAACATTAAACAGTCTTTAAATGCAGACTTTAAACAAAAAAAGTTACCATGGAGCCCTAGATGGTTGTACAACTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_09259876_09260073.mRNA True 561 mRNA 0.43 1 9259641 9260201

Neighbor

gene id symbol gene type direction distance location
CI01000016_09240403_09243601 NA coding upstream 16040 9239745 ~ 9243601 (+)
CI01000016_09228083_09231481 NA coding upstream 28006 9228083 ~ 9231635 (+)
CI01000016_09183871_09184200 TMEM238 coding upstream 75214 9183376 ~ 9184427 (+)
CI01000016_09181426_09182326 NA coding upstream 77315 9181426 ~ 9182326 (+)
CI01000016_09138227_09156795 NA coding upstream 102169 9137434 ~ 9157472 (+)
CI01000016_09266373_09278553 NA coding downstream 5364 9265565 ~ 9279131 (+)
CI01000016_09299769_09306497 RORC coding downstream 39568 9299769 ~ 9307385 (+)
CI01000016_09317824_09332379 NA coding downstream 57521 9317722 ~ 9332714 (+)
CI01000016_09340494_09349036 PIP5K1A, PIP5K1AB coding downstream 80293 9340494 ~ 9349036 (+)
CI01000016_09357617_09361063 PSMD4B, PSMD4, PSMD4A coding downstream 97416 9357617 ~ 9361063 (+)
G98280 NA non-coding upstream 32733 9224449 ~ 9226908 (+)
G98392 NA non-coding upstream 47875 9211350 ~ 9211766 (+)
G98391 NA non-coding upstream 83681 9175199 ~ 9175960 (+)
G98385 NA non-coding upstream 133710 9125719 ~ 9125931 (+)
G98375 NA non-coding upstream 161538 9085228 ~ 9098103 (+)
G98290 NA non-coding downstream 66173 9326374 ~ 9375553 (+)
G98271 NA non-coding downstream 116016 9376217 ~ 9378050 (+)
G98409 NA non-coding downstream 139754 9399955 ~ 9402046 (+)
G98414 NA non-coding downstream 143666 9403867 ~ 9404218 (+)
G98415 NA non-coding downstream 144166 9404367 ~ 9404679 (+)
G98288 NA other upstream 256924 8996098 ~ 9002717 (+)
G97824 NA other upstream 1243866 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 1473918 7783987 ~ 7784996 (+)
G96389 NA other upstream 2098351 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 3851778 5405791 ~ 5407963 (+)
CI01000016_09796196_09842235 NA other downstream 535430 9795950 ~ 9842576 (+)
G99041 NA other downstream 664217 9924418 ~ 9925654 (+)
G99410 NA other downstream 974199 10234400 ~ 10236851 (+)
G99456 NA other downstream 1034190 10294391 ~ 10298904 (+)
G99940 NA other downstream 2411444 11671645 ~ 11672873 (+)

Expression


Co-expression Network