CI01000016_09363759_09363932


Basic Information

Item Value
gene id CI01000016_09363759_09363932
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9363759 ~ 9364373 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_09363759_09363932.mRNA
GAGGATGAGGAGGATTACGATGTGATGCAGGATCCAGACTTTCTACAGAGTGTGCTGGAGAACCTTCCAGGAGTCGACCCCAACAATGAAGCCATCCGTAATGCCATGGGCTCTCTGGCGTCCCAGAACAGAACAAAACCACCTGAGGGCAAGAAAGATGATGAAAAGAAATAGAGAAACGGTCTGGACTGACAGAGGAGGACAAAGGGCAAATACAAATGAAGGGTTTCCAACTGGATGATGGATAGAGATGAACACAATGCATATAACTGATTAAAAAAGCAAGAATAATGATTTAATGAGTTTTCTTATGTTAGAGGGAGGAAAAACAGAACAGACTAACACACTTTATTGAAAGAAAAGAATATCCATAAAACACTTCTTACATGTAAAAGCATCTTTATTTGTTCCTTTTAAGTAACCTGATCTTGAACATATTTGGTGGAGCAGAAAAAAATGTTAAACACTACTTCAAATAGTAGTGCTCACTTGTGTTTATTTGCTAGATAGGTTACTTTATGCCACCCACCCAACTATAATTTCTCTTGTGGTTTTTGGATGACTTGTAAAGGTTTCTTTGTCAATTTTGTATCACTATTTTCAGTTCCTTTTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_09363759_09363932.mRNA True 615 mRNA 0.38 1 9363759 9364373

Neighbor

gene id symbol gene type direction distance location
CI01000016_09357617_09361063 PSMD4B, PSMD4, PSMD4A coding upstream 2696 9357617 ~ 9361063 (+)
CI01000016_09340494_09349036 PIP5K1A, PIP5K1AB coding upstream 14723 9340494 ~ 9349036 (+)
CI01000016_09317824_09332379 NA coding upstream 31045 9317722 ~ 9332714 (+)
CI01000016_09299769_09306497 RORC coding upstream 56374 9299769 ~ 9307385 (+)
CI01000016_09266373_09278553 NA coding upstream 84628 9265565 ~ 9279131 (+)
CI01000016_09364728_09366356 VAMP1 coding downstream 276 9364649 ~ 9366356 (+)
CI01000016_09524279_09527107 NA coding downstream 159244 9523617 ~ 9527207 (+)
CI01000016_09615039_09616082 NA coding downstream 248418 9612791 ~ 9617419 (+)
CI01000016_09663511_09664293 NA coding downstream 299138 9663511 ~ 9664495 (+)
CI01000016_09664848_09674309 CEP192, SEH1L coding downstream 300475 9664848 ~ 9674728 (+)
G98280 NA non-coding upstream 136851 9224449 ~ 9226908 (+)
G98392 NA non-coding upstream 151993 9211350 ~ 9211766 (+)
G98391 NA non-coding upstream 187799 9175199 ~ 9175960 (+)
G98385 NA non-coding upstream 237828 9125719 ~ 9125931 (+)
G98375 NA non-coding upstream 265656 9085228 ~ 9098103 (+)
G98271 NA non-coding downstream 11844 9376217 ~ 9378050 (+)
G98409 NA non-coding downstream 35582 9399955 ~ 9402046 (+)
G98414 NA non-coding downstream 39494 9403867 ~ 9404218 (+)
G98415 NA non-coding downstream 39994 9404367 ~ 9404679 (+)
G98416 NA non-coding downstream 40645 9405018 ~ 9405471 (+)
G98288 NA other upstream 361042 8996098 ~ 9002717 (+)
G97824 NA other upstream 1347984 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 1578036 7783987 ~ 7784996 (+)
G96389 NA other upstream 2202469 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 3955896 5405791 ~ 5407963 (+)
CI01000016_09796196_09842235 NA other downstream 431258 9795950 ~ 9842576 (+)
G99041 NA other downstream 560045 9924418 ~ 9925654 (+)
G99410 NA other downstream 870027 10234400 ~ 10236851 (+)
G99456 NA other downstream 930018 10294391 ~ 10298904 (+)
G99940 NA other downstream 2307272 11671645 ~ 11672873 (+)

Expression


Co-expression Network