Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000016_09475913_09487996 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000016 |
| NCBI id | null |
| chromosome length | 12175457 |
| location | 9474997 ~ 9488292 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000016_09475913_09487996.mRNA | False | 1773 | mRNA | 0.44 | 4 | 9474997 | 9488292 |
| TU112509 | True | 261 | lncRNA | 0.41 | 1 | 9475533 | 9475793 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000016_09410080_09416286 | NCALDA, NCALDB, HPCAL1, NCALD.L, NCALD | coding | downstream | 57230 | 9409906 ~ 9417767 (-) |
| CI01000016_09384358_09401878 | GRHL2A | coding | downstream | 73119 | 9384162 ~ 9401878 (-) |
| CI01000016_09376209_09382250 | TAPBPL | coding | downstream | 92747 | 9376209 ~ 9382250 (-) |
| CI01000016_09251602_09253351 | NA | coding | downstream | 221646 | 9251412 ~ 9253351 (-) |
| CI01000016_09224593_09226660 | NA | coding | downstream | 248337 | 9224467 ~ 9226660 (-) |
| CI01000016_09510177_09512196 | ID4 | coding | upstream | 21367 | 9509622 ~ 9512428 (-) |
| CI01000016_09638800_09651752 | CEP76 | coding | upstream | 150300 | 9638592 ~ 9651752 (-) |
| CI01000016_09654611_09661197 | NA | coding | upstream | 165210 | 9653502 ~ 9661197 (-) |
| CI01000016_09739013_09746676 | NA | coding | upstream | 250721 | 9739013 ~ 9746676 (-) |
| CI01000016_09959197_09962175 | NA | coding | upstream | 469630 | 9957922 ~ 9963244 (-) |
| G98853 | NA | non-coding | downstream | 77478 | 9356362 ~ 9397519 (-) |
| G98808 | NA | non-coding | downstream | 129549 | 9344604 ~ 9345448 (-) |
| G98838 | NA | non-coding | downstream | 148757 | 9325886 ~ 9326240 (-) |
| G98809 | NA | non-coding | downstream | 149299 | 9325167 ~ 9325698 (-) |
| G98802 | NA | non-coding | downstream | 150502 | 9317571 ~ 9324495 (-) |
| G98885 | NA | non-coding | upstream | 1273 | 9489565 ~ 9489806 (-) |
| G98887 | NA | non-coding | upstream | 5351 | 9493643 ~ 9493939 (-) |
| G98898 | NA | non-coding | upstream | 25473 | 9513765 ~ 9513998 (-) |
| G98901 | NA | non-coding | upstream | 30087 | 9518379 ~ 9518655 (-) |
| G98906 | NA | non-coding | upstream | 34736 | 9523028 ~ 9523298 (-) |
| G98691 | NA | other | downstream | 217386 | 9256102 ~ 9257611 (-) |
| G98679 | NA | other | downstream | 235068 | 9234996 ~ 9239929 (-) |
| CI01000016_08926089_08945071 | NA | other | downstream | 529768 | 8925960 ~ 8945229 (-) |
| CI01000016_08893013_08893496 | NPPCL, ANFC1 | other | downstream | 580260 | 8888833 ~ 8894737 (-) |
| G97341 | NA | other | downstream | 3315276 | 6158986 ~ 6159721 (-) |
| G99178 | NA | other | upstream | 326069 | 9814361 ~ 9814955 (-) |
| G100190 | NA | other | upstream | 562876 | 10051168 ~ 10052389 (-) |
| G98878 | NA | non-coding | upstream | 4601 | 9480394 ~ 9480627 (-) |
