CI01000016_09663511_09664293


Basic Information

Item Value
gene id CI01000016_09663511_09664293
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9663511 ~ 9664495 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_09663511_09664293.mRNA
AGACTGTGTCCAGCTCAAGGGGTTGCATTCACTTTTATGAGTTTTTCTACTTTTAAAACTCACTTAAACATGAGAGGAAATATTTTAATTGCCTCTGTGATTTTGATGTCTTTGTTTTGTTTGGGACAAACACTTGAGTGCTTTCGGTGTGATCTTGGATTCTGGAATCTGTGTTACACCACTAAGACAAATTGCAGTGATGATGAGTTGTGTTATGTGGGAATTGGTAAAGCAGCTTCTGTCCTGGATATAAAGGTGATGGGTTGTCTTCCCATGGAGTCATGCAACAAGACCACAGTTGTAGAGTTTCTTGCCAATAAGACCTTATACACCATGAAGACCACGTGTTGTGAGGAAGACTTCTGCAACTCCTGCCCTGCAGTTCAGTTGTCCCTCACTCCTCTCTTGTTTACCATACTTCTCATTGCCCAGATGATGGGTGCTTTCTGATGATTTTTTTTTTCTTTTGGACTTCCAAGTTCTAATTGTCATAAGGGATTGAAGGTTTTTCTTTCATGTTTACATTCTTCATGTACTGTAACCGTTTACTTGACTGTTTTGAATGATCTAAAACGGCTGCCTTCATGTCAGAGCACGGTTGGATACATTTTTCTAGTTGTTTTTGTTCATCCAAAAAGAGTAAAGATTACTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_09663511_09664293.mRNA True 652 mRNA 0.39 3 9663511 9664495

Neighbor

gene id symbol gene type direction distance location
CI01000016_09615039_09616082 NA coding upstream 46092 9612791 ~ 9617419 (+)
CI01000016_09524279_09527107 NA coding upstream 136304 9523617 ~ 9527207 (+)
CI01000016_09364728_09366356 VAMP1 coding upstream 297155 9364649 ~ 9366356 (+)
CI01000016_09363759_09363932 NA coding upstream 299138 9363759 ~ 9364373 (+)
CI01000016_09357617_09361063 PSMD4B, PSMD4, PSMD4A coding upstream 302448 9357617 ~ 9361063 (+)
CI01000016_09664848_09674309 CEP192, SEH1L coding downstream 353 9664848 ~ 9674728 (+)
CI01000016_09686132_09706397 CEP192 coding downstream 21637 9686132 ~ 9706453 (+)
CI01000016_09731997_09734823 NA coding downstream 67502 9731997 ~ 9734823 (+)
CI01000016_09748780_09759954 MRS2 coding downstream 84285 9748780 ~ 9760383 (+)
CI01000016_09788926_09791625 SDC2 coding downstream 124431 9788926 ~ 9791923 (+)
G98953 NA non-coding upstream 65797 9597475 ~ 9597714 (+)
G98950 NA non-coding upstream 76198 9587112 ~ 9587313 (+)
G98949 NA non-coding upstream 76943 9586229 ~ 9586568 (+)
G98935 NA non-coding upstream 95300 9567985 ~ 9568211 (+)
G98932 NA non-coding upstream 100052 9563160 ~ 9563459 (+)
G99013 NA non-coding downstream 83488 9747983 ~ 9748261 (+)
G99022 NA non-coding downstream 101483 9765978 ~ 9769724 (+)
G99023 NA non-coding downstream 105370 9769865 ~ 9773224 (+)
G99024 NA non-coding downstream 121115 9785610 ~ 9786563 (+)
G99034 NA non-coding downstream 192017 9856512 ~ 9856848 (+)
G98288 NA other upstream 660794 8996098 ~ 9002717 (+)
G97824 NA other upstream 1647736 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 1877788 7783987 ~ 7784996 (+)
G96389 NA other upstream 2502221 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 4255648 5405791 ~ 5407963 (+)
CI01000016_09796196_09842235 NA other downstream 131136 9795950 ~ 9842576 (+)
G99041 NA other downstream 259923 9924418 ~ 9925654 (+)
G99410 NA other downstream 569905 10234400 ~ 10236851 (+)
G99456 NA other downstream 629896 10294391 ~ 10298904 (+)
G99940 NA other downstream 2007150 11671645 ~ 11672873 (+)

Expression


Co-expression Network