CI01000016_09731997_09734823


Basic Information

Item Value
gene id CI01000016_09731997_09734823
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9731997 ~ 9734823 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_09731997_09734823.mRNA
AGAAAACTTACCTCATCTGACTGGACCCAGGAATGTAGAGATGCCTTTAGTGCGCTGAAACAGGCTTTACTCGAAAGAGTAATTCTGGCACCCCCAGATTTTAGTAAATCCTTCTTGCTGTCTGTTGATGCTTCCAGTAATGGGCTTAGTGCGGTGCTTTCTCAGGTAGTGGCGGGTGGAGTGGTCGCTCGCCCCATAGCCTTTGCTAGCAAGTCACTTAATTATGCCCATTCAAAATATTCAGCACACAGTACCCCTGGGTTAGAGTTTTTTGCTCTTAAACAGGCAGTCTGTGACAAATTTAGTCACTGGCTCAAAGGTCAGCAGTCCTCAGTACGGACAGACAACAACCCACTGACCTACATTCTTACAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_09731997_09734823.mRNA True 375 mRNA 0.46 2 9731997 9734823

Neighbor

gene id symbol gene type direction distance location
CI01000016_09686132_09706397 CEP192 coding upstream 25544 9686132 ~ 9706453 (+)
CI01000016_09664848_09674309 CEP192, SEH1L coding upstream 57269 9664848 ~ 9674728 (+)
CI01000016_09663511_09664293 NA coding upstream 67502 9663511 ~ 9664495 (+)
CI01000016_09615039_09616082 NA coding upstream 114578 9612791 ~ 9617419 (+)
CI01000016_09524279_09527107 NA coding upstream 204790 9523617 ~ 9527207 (+)
CI01000016_09748780_09759954 MRS2 coding downstream 13957 9748780 ~ 9760383 (+)
CI01000016_09788926_09791625 SDC2 coding downstream 54103 9788926 ~ 9791923 (+)
CI01000016_09796196_09842235 NA coding downstream 61127 9795950 ~ 9842576 (+)
CI01000016_09868120_09886212 NA coding downstream 133253 9868076 ~ 9886233 (+)
CI01000016_09897221_09902690 NA coding downstream 162023 9896846 ~ 9902882 (+)
G98953 NA non-coding upstream 134283 9597475 ~ 9597714 (+)
G98950 NA non-coding upstream 144684 9587112 ~ 9587313 (+)
G98949 NA non-coding upstream 145429 9586229 ~ 9586568 (+)
G98935 NA non-coding upstream 163786 9567985 ~ 9568211 (+)
G98932 NA non-coding upstream 168538 9563160 ~ 9563459 (+)
G99013 NA non-coding downstream 13160 9747983 ~ 9748261 (+)
G99022 NA non-coding downstream 31155 9765978 ~ 9769724 (+)
G99023 NA non-coding downstream 35042 9769865 ~ 9773224 (+)
G99024 NA non-coding downstream 50787 9785610 ~ 9786563 (+)
G99034 NA non-coding downstream 121689 9856512 ~ 9856848 (+)
G98288 NA other upstream 729280 8996098 ~ 9002717 (+)
G97824 NA other upstream 1716222 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 1946274 7783987 ~ 7784996 (+)
G96389 NA other upstream 2570707 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 4324134 5405791 ~ 5407963 (+)
G99041 NA other downstream 189595 9924418 ~ 9925654 (+)
G99410 NA other downstream 499577 10234400 ~ 10236851 (+)
G99456 NA other downstream 559568 10294391 ~ 10298904 (+)
G99940 NA other downstream 1936822 11671645 ~ 11672873 (+)

Expression


Co-expression Network