CI01000016_09748780_09759954 (MRS2)


Basic Information

Item Value
gene id CI01000016_09748780_09759954
gene name MRS2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9748780 ~ 9760383 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_09748780_09759954.mRNA
ATGGAGCCATGCTTGAGGTTTGTGTGTCGAGAGAGTCTCAGGAAAGTGTCGATGAAATGCTGGACATGGAGATCTGTGAAGTGCTCAAGATCACCTTTCAAACGCCCTCTTTCATCAACATGTGGACGAGCACATCAACACAGCACGCTGCTGCTGAGAGCTCAGGGACCCCACCTCTCCTGTCGACAAAGAGGCACAGATGCATCCCAGGCAGCCTTGTCTAGTGTTGCTCCAGTGTTTGTTGTGATGAAATTTGAACGTGATGGGAATGTGACATCATTTGAAAGGAAGAAGACTGAATTGTATCAGGAGCTTAGTTTGCAGGCGAGAGATCTGAGATTCCAGCACTTAACAAGTATAACAGCACGGAACAATGCCATCATCATACGCATGGAGTCCCTGAAGGCAGTGGTTACCCCTGAGTGTTTACTGGTGCTGGATTTCCGTGGTCTCGGCCTGGAGAAATGGCTGGTGTTAGAACTTGGGCCACAGTTAGCAGGAGATGGAAATTTGGCTACTTACTCCCTGCCCTTTGAGTTCAGAGCTCTGGAAGCCATTCTGCAACACAGGGTGAATTTACTGCAGATGCGGCTGAATGAAGTTCAGCCTCAGGTTCTGGATTGTCTGGAGTCGTTGGTCGACCCAAAGCTCCTCTCTGCCGACCGCAGCAAACTCCATATGCTCCTGCTTAATAGCAAGAGCCTTTCAGAGCTAGAGACGGACATTAGAATGTTTAAAGACAGTCTGCTGAAAATCCTGGATGAGGATGAACTGATAGATGAACTCTGTGTCACCAAGTGGAGCGACCCGCAAGTGTTTGAGGAGAGCAGTCTGGGTATAGATCACGCTGAAGAGATGGAGCTACTGCTGGAGAATTACTTCATGCAAGCAGAGGAGCTTGGCAACAAAGCCAGAGAGCTGAAAGACCTCATCGATGACTCTGAAAGCGTCATCTTCATTAACCTGGATAGCCATCGGAATGTCATGATGCGCCTGAACCTCCAGCTCACCATGGGAACCTTCTCCCTCTCCTTATTTGGTCTGATGGGTGTGGCTTTTGGAATGAATTTAGAATCTTCCTTTGAGGAGGTCAGAACAGCAGGGGGAGACAAACCCCCACTCAGAACTGATTCACACAGGTTGTATATCCCAGAAGGTGAAGCTGTAAAAGAGAACGAAGAGAGCAGCTGGTTTAAGGAGCGCAGACGAGTGCCATCCACGATTTCTTTCCAAAAGACTTCTTAAGAGGAATAATGAGGAACATTTGGATATTCCTGACACTTTCAGCAGCTGTCTGCTTGTCCAGCGATAAGGTGAGTTTGAGCAGAGTTCATGTTTTTTTGCGCCGATCTACTTTTGTTGATGGTACATACTTCCTATATGCGGTACCCTATATAGTGATACACATATTGTGTAGTGTTGTTATGACAGACATAATGCATATATGCTTATTTTATACTGTTTAATCACTCTTAACATGCATATTTTGCTTCAGCAAAAGTGTCAACTTGGTCTTGGGAATACCTGTAAAGCCCATCGTGATCATATTATGATATTGTTGTATAACAACATCAGTGATGTGATGTGAAGTGATAATGCTCATCATTTTACAGGGATATCTAAACTTCTGAAAAAAAAAAAAAAAAAATTCTTCAAAAAGTTCAATGTCACTTA

Function

symbol description
mrs2 Predicted to act upstream of or within ion transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Orthologous to human MRS2 (magnesium transporter MRS2).

GO:

id name namespace
GO:0045016 mitochondrial magnesium ion transmembrane transport biological_process

KEGG:

id description
K16075 MRS2, MFM1; magnesium transporter

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_09748780_09759954.mRNA True 1674 mRNA 0.45 11 9748780 9760383

Neighbor

gene id symbol gene type direction distance location
CI01000016_09731997_09734823 NA coding upstream 13957 9731997 ~ 9734823 (+)
CI01000016_09686132_09706397 CEP192 coding upstream 42327 9686132 ~ 9706453 (+)
CI01000016_09664848_09674309 CEP192, SEH1L coding upstream 74052 9664848 ~ 9674728 (+)
CI01000016_09663511_09664293 NA coding upstream 84285 9663511 ~ 9664495 (+)
CI01000016_09615039_09616082 NA coding upstream 131361 9612791 ~ 9617419 (+)
CI01000016_09788926_09791625 SDC2 coding downstream 28543 9788926 ~ 9791923 (+)
CI01000016_09796196_09842235 NA coding downstream 35567 9795950 ~ 9842576 (+)
CI01000016_09868120_09886212 NA coding downstream 107693 9868076 ~ 9886233 (+)
CI01000016_09897221_09902690 NA coding downstream 136463 9896846 ~ 9902882 (+)
CI01000016_09934128_09954587 NA coding downstream 173745 9934128 ~ 9955328 (+)
G99013 NA non-coding upstream 519 9747983 ~ 9748261 (+)
G98953 NA non-coding upstream 151066 9597475 ~ 9597714 (+)
G98950 NA non-coding upstream 161467 9587112 ~ 9587313 (+)
G98949 NA non-coding upstream 162212 9586229 ~ 9586568 (+)
G98935 NA non-coding upstream 180569 9567985 ~ 9568211 (+)
G99022 NA non-coding downstream 5595 9765978 ~ 9769724 (+)
G99023 NA non-coding downstream 9482 9769865 ~ 9773224 (+)
G99024 NA non-coding downstream 25227 9785610 ~ 9786563 (+)
G99034 NA non-coding downstream 96129 9856512 ~ 9856848 (+)
G99040 NA non-coding downstream 103620 9864003 ~ 9864223 (+)
G98288 NA other upstream 746063 8996098 ~ 9002717 (+)
G97824 NA other upstream 1733005 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 1963057 7783987 ~ 7784996 (+)
G96389 NA other upstream 2587490 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 4340917 5405791 ~ 5407963 (+)
G99041 NA other downstream 164035 9924418 ~ 9925654 (+)
G99410 NA other downstream 474017 10234400 ~ 10236851 (+)
G99456 NA other downstream 534008 10294391 ~ 10298904 (+)
G99940 NA other downstream 1911262 11671645 ~ 11672873 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location