CI01000016_09796196_09842235


Basic Information

Item Value
gene id CI01000016_09796196_09842235
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9795950 ~ 9842576 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_09796196_09842235.mRNA
GTATAAAATGTTTTCATATCAGAAACGAAACCATGAAAAAAGTTGAAAACAGTTCCAGGAAACAATTTATTTAATAACCAGTTGGACTGCATCACTGCCAGATCAGAGAAAATTTACTTTATTTTATATTTTAAATGGTTTAAAGCCGCATTTAACTAATTTAATACTGTATTAATAAGTGATTTTTTATATATTTTTTTTAAACATGTGTATGACTTGTTCTTTTTTCTCTCATGTGCTTTTCAGATGACTGGTAATAAAAACAGGGGTCATAACTCCACCAGTCAGGCGCTGCTGACTCTTCTTATCCTCTGCTTTCTTCTACAATGTCAATCTAGGCCTCACAGTTATGACAGTAAACCCCTGTCAGAAATATCCAGAGAGGTTTCTAAATACTCTGACATCGCTCAACAAATCATAAACCTCGCAGTATATGGAAAAGCCCAGAACCGTTCCTACGAGAGGCTGGCTGAGTTCACTGATACTATTGGAAACAGAGTCAGTGGCTCTAAGAACCTAGACCTGGCCATTAAGTACATGTACAATGCCCTTAGACAGGACGGACTGGAGAACGTGCACCTAGAGCCTGTGAAGATCCCTCACTGGGTGCGGGGGGTGGAGAGTGCGGTGATGCTTCTACCGAGAAACCACACTTTAGCCATACTTGGACTTGGTAGTAGTGTAGGAACTCCTCCAGGGGGTATAGAGGCAGAGGTAATCGTGGTGGACTCTTTTGAAGAGCTGGAGAAGCGAGCGAGTGAGGCTAAAGGGAAAATCGTTGTGTATAACCAGCCGTTTGTCAGCTATGGGGAGACCGTATACTACCGGGCTTTAGGGGCCTCAGAGGCTGCTAAAGTTGGAGCCGTTGCCTCCCTTATCCGTTCAGTAACTCCATTCTCCATCAACAGTTCTAGGTTTTGGCCCCTGCCTTGTCCAGATTTGCTGCAGAATATTGAATATGTGCTTCAGTATGATTCCCTTTGGATAGTGGGCTCATTAGGCTCAACTCATCCTCTCTCTGTGCACTCTCTTAATTTCACTCCCTCATTCATATTTCAGTACCTCGTAATTAATAGCCTCATCCTGTCAGAGCTCATTAACGGTGACATGATAGTGTTTAATTATGAGGTGGTGCTGCTCAGTGGTCACCTGGACAGCTGGGATGTGGGCCAGGGCGCTATGGATGATGGAGGCGGAGTCGCCATTTCCTGGGAGGCACTTTCTTTGATCAGAGACTTAGGGTTGCGTCCCAAAAGAACACTGAGGACGGTGCTGTGGTCTGCAGAGGAGCCTGGCGGGGCCAACATCTCAAACTTTGACATGGTTATGGAGTCTGACCTGGGCACCTTCCGCCCTCTGGGACTGCAGTTCACTGGCAGTGACAAAGCTCGGGCAATCATGAAGGAGGTGATGAAACTGTTGGCTGCCATCAATGTCACATCACTTGAAGAACACGGAGAGGGAACGGACATTAACATGTGGATGAAGGCTGGGGTTCCAGGCGCCAGCCTGCACACTGCAGACCAGCGGTACTTCTGGTTCCACCACAGCGACGGTGATACAATGAGCGTCCAAAACCCAGAGGAGATGAACCTGTGTTCCGCTGTTTGGGCTGTGGTGGCCTACGTGGTCGCTGACCTGGAGGAAATGCTCCCTAGATAGTGAGTCACTCATAAACGACTGAACAAACCCCTGTCCGTCAGCTTACAGCAGCGGTCGATTACACCGTTACCTTGAGAATTCTCTATCAGCCTGATGGTTTTTTTTGTTTTTTTTTTGTGATTTGACTTCATTGTAACCTCAGATACACTCCTGATCACTCCACTGTCATGTAGTATGTACTGCTCCTTTGATACATGTGTAATTTTCTTTTATATTTTTCTATTATCCTATTATAATGTGAAAGAGTTCTAATTGTGTAATTTCTATTCATAATTTATTTATTGATTTAACATTTTTTACACATAAGCAGTTAATAATCTCAAATGTACATAAAAAACTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_09796196_09842235.mRNA False 2003 mRNA 0.44 7 9795950 9842576

Neighbor

gene id symbol gene type direction distance location
CI01000016_09788926_09791625 SDC2 coding upstream 4027 9788926 ~ 9791923 (+)
CI01000016_09748780_09759954 MRS2 coding upstream 35567 9748780 ~ 9760383 (+)
CI01000016_09731997_09734823 NA coding upstream 61127 9731997 ~ 9734823 (+)
CI01000016_09686132_09706397 CEP192 coding upstream 89497 9686132 ~ 9706453 (+)
CI01000016_09664848_09674309 CEP192, SEH1L coding upstream 121222 9664848 ~ 9674728 (+)
CI01000016_09868120_09886212 NA coding downstream 25500 9868076 ~ 9886233 (+)
CI01000016_09897221_09902690 NA coding downstream 54270 9896846 ~ 9902882 (+)
CI01000016_09934128_09954587 NA coding downstream 91552 9934128 ~ 9955328 (+)
CI01000016_09970010_09999304 NA coding downstream 127339 9969915 ~ 10000721 (+)
CI01000016_10042324_10051398 CTNNB1.L, CTNNB1 coding downstream 199440 10042016 ~ 10052367 (+)
G99024 NA non-coding upstream 9387 9785610 ~ 9786563 (+)
G99023 NA non-coding upstream 22726 9769865 ~ 9773224 (+)
G99022 NA non-coding upstream 26226 9765978 ~ 9769724 (+)
G99013 NA non-coding upstream 47689 9747983 ~ 9748261 (+)
G98953 NA non-coding upstream 198236 9597475 ~ 9597714 (+)
G99034 NA non-coding downstream 13936 9856512 ~ 9856848 (+)
G99040 NA non-coding downstream 21427 9864003 ~ 9864223 (+)
G99056 NA non-coding downstream 56977 9899553 ~ 9900079 (+)
G99062 NA non-coding downstream 77691 9920267 ~ 9920479 (+)
G99063 NA non-coding downstream 78605 9921181 ~ 9940824 (+)
G98288 NA other upstream 793233 8996098 ~ 9002717 (+)
G97824 NA other upstream 1780175 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 2010227 7783987 ~ 7784996 (+)
G96389 NA other upstream 2634660 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 4388087 5405791 ~ 5407963 (+)
G99041 NA other downstream 81842 9924418 ~ 9925654 (+)
G99410 NA other downstream 391824 10234400 ~ 10236851 (+)
G99456 NA other downstream 451815 10294391 ~ 10298904 (+)
G99940 NA other downstream 1829069 11671645 ~ 11672873 (+)
G100178 NA other downstream 2318065 12160641 ~ 12162845 (+)

Expression


Co-expression Network