CI01000016_09868120_09886212


Basic Information

Item Value
gene id CI01000016_09868120_09886212
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9868076 ~ 9886233 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_09868120_09886212.mRNA
CCATAAAAGGAGATTTGGCAGTCTGTACCTGCTTTGCCATAAAGATGAAGATCACTGTTCTTCTGCATCTGACTCTATTGCTGGTGAGGACTTCAAGCCTTGAAGATTCATCTGTGGATAAATCAATAGATATTTCTGGTGGCAGCAGTCCGCATGTAAACTCTGTTCAGCATGGAGAATGTAGCTACACCTTCATACTGCCAGAACCTGAGGAGAGCAGGACTGGTAGCTGGACAGAAGAACATGAGGGTAATTATGAAGGTAACAGTGTCCAGAAAGAATCTCCACAGGGGAAGCAAAGCCACTTAAACCAGAGGATCCAACACCTGGAGCTTGCCATGGAAAATTACACCCGCTGGATCCAAAAGTCTAACACAACACACTCTCATGACAATTCTTCACTGAGAAAAATAATTGTAATTTTAAAGATTGAGGTCTTTGTAAAGGACTTTCTGACAAAAGACACAACACACCTGCGGAATAGTGCTCTCCATAATGAAATGACAGCCATGCTGGATCTTGGCACCAAACTGTTTTCCCAGTCAACCCAACACATCAGGAGACTAACAGACATACAGACACAGGTTTTCAATCAGACTTCTAGACTTGAGATTAAGTCACTGGAAAACTCCCTGTCCTCCAGCAAACTTGAGAACAAACTCCTCTGGCAAACCAGTGAGATCAACCAACTCTGGGACAAAACAAGTACACTAGAGCAGCGTATGCATAACTTGGAGGCACGTCACCATGCAGAACTGGGCTGGATAAAGGGTGAGCGGACAGAGCTTCAGAGACTCTTGGCATCCCAGAGATCTTCAATACAGAGCCTGGAGCTTAATCTAGAGGAGGTCGTCACAAACAACAGCGCCCTCTACCGAGAACAACTACAAATGCATAGTACCATCAATGATCTGTTTAAACTGTGCTCCAAGAACAAAGTGAGTCCAAATGTTTTCAAGCAAATGGATGATCAGATAAAATACAGAGACTGTGCCGAACTCTTCAGGGCTGGATTTAACAGGAGTGGAATTTACACCATCTACATTAGCACGCAAGACATGCATAAGGTTTATTGCAACATGGAAAGTGCTGGTGGGGGCTGGACCATCATACAATCAAGGACAGATGGAACGCTGGACTTCCACAGAACCTGGATAGAGTATAAGATGGGCTTTGGGAGTCTGACTGGAGAGCATTGGTTGGGAAATGAGCTGGTGTACCAGTTGACCAATCAGAGGCAGTACACTCTTAGACTGGAGTTGACAGACTGGGATGGAAAACTGGCCTTCTCCCAGTATGACAAGTTTTACCTTGGTAGTGAGAAGCAAAACTACAGGTTATTCCTGAAGAGCTACAGTGGTACAGCTGGCAGGCAGAGCAGTTTGGTGATAAATGGGGCCGACTTTAGCACAAAAGACATGGATAACGACAACTGTATCTGCAAGTGTGCACTCATGCTCACAGGTGGCTGGTGGTTTGATGCCTGTGGCCCATCAAACCTCAACGGCATGTACTACACCTCTGGGCAAAATTCTGGCAAACTTGATGGCATCAAGTGGCACTACTTCAAAGGCCCCAACTACTCTTTACGTGCCACCACCATGATGATCCGCCCATTAAACTTTTGAGGAATCAATCATCTGTCATCA

Function

NR:

description
Angiopoietin 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_09868120_09886212.mRNA True 1649 mRNA 0.45 10 9868076 9886233

Neighbor

gene id symbol gene type direction distance location
CI01000016_09796196_09842235 NA coding upstream 25500 9795950 ~ 9842576 (+)
CI01000016_09788926_09791625 SDC2 coding upstream 76153 9788926 ~ 9791923 (+)
CI01000016_09748780_09759954 MRS2 coding upstream 107693 9748780 ~ 9760383 (+)
CI01000016_09731997_09734823 NA coding upstream 133253 9731997 ~ 9734823 (+)
CI01000016_09686132_09706397 CEP192 coding upstream 161623 9686132 ~ 9706453 (+)
CI01000016_09897221_09902690 NA coding downstream 10613 9896846 ~ 9902882 (+)
CI01000016_09934128_09954587 NA coding downstream 47895 9934128 ~ 9955328 (+)
CI01000016_09970010_09999304 NA coding downstream 83682 9969915 ~ 10000721 (+)
CI01000016_10042324_10051398 CTNNB1.L, CTNNB1 coding downstream 155783 10042016 ~ 10052367 (+)
CI01000016_10333877_10334229 NA coding downstream 447644 10333877 ~ 10334346 (+)
G99040 NA non-coding upstream 3853 9864003 ~ 9864223 (+)
G99034 NA non-coding upstream 11228 9856512 ~ 9856848 (+)
G99024 NA non-coding upstream 81513 9785610 ~ 9786563 (+)
G99023 NA non-coding upstream 94852 9769865 ~ 9773224 (+)
G99022 NA non-coding upstream 98352 9765978 ~ 9769724 (+)
G99056 NA non-coding downstream 13320 9899553 ~ 9900079 (+)
G99062 NA non-coding downstream 34034 9920267 ~ 9920479 (+)
G99063 NA non-coding downstream 34948 9921181 ~ 9940824 (+)
G99281 NA non-coding downstream 182011 10068244 ~ 10068606 (+)
G98288 NA other upstream 865359 8996098 ~ 9002717 (+)
G97824 NA other upstream 1852301 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 2082353 7783987 ~ 7784996 (+)
G96389 NA other upstream 2706786 7160641 ~ 7161290 (+)
G99041 NA other downstream 38185 9924418 ~ 9925654 (+)
G99410 NA other downstream 348167 10234400 ~ 10236851 (+)
G99456 NA other downstream 408158 10294391 ~ 10298904 (+)
G99940 NA other downstream 1785412 11671645 ~ 11672873 (+)
G100178 NA other downstream 2274408 12160641 ~ 12162845 (+)

Expression


Co-expression Network