CI01000016_09897221_09902690


Basic Information

Item Value
gene id CI01000016_09897221_09902690
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9896846 ~ 9902882 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_09897221_09902690.mRNA
ATTTAAATTCTAGTGATTGTCTTTTATAACACTGATCACAATTAAGCATTGTATAATAGTCAATATGTAATAGAGTTAGATGTTTGAAACTGTTTGAGCTTTCCATCTAAAGTGATGCAAAGCAAACTGCATCATCGATGTCAAGCTGCAGTTTCAGCTGAATACTGACATGATGCCAATTGTTGAAGTACTGTGCATGAGCAAACACCTCATCTATTTTGTTTCTTTTAGATAATTGGTGTGTGCTGGATAACAACAAAATGTTACATCTTATTCTGGTTCTCTCTGGAGTTTGTACAGTGGGCATGACCATGCGTGAGTATCGCTCACCACTTCAAATTGTCTAAACTTTTTCACTGTGGAACACCATCAAACATGCAAAATGACACTGCAAAAATTGCTATTAGAAAATTTAAAATAAAATTAAGAACTGCTAAAAATTCTGGAACATCTTTACCTGATTTTTACTCTTACTCACTTGCTGTTGGAGATGGCAGTGGGTATGAATTTTCCACTGCACATGACGGTCGCATCAATGGTATTAGAGTCTGGGAATACAGTAGTGCATACATTACTGGAATTCAGCTGATGTATGATGGTAATTGGACAACACCGGTTTGTTTAAACTATGGCACTCCCCAAGAGATGACACTTCTTGATAATGAATCCATCATTCAAGTCTCTGGAAAGTATTACAGTGGCTACATCTATGAGCTTATGTTTGTCACTAGTCACGGGCGCTCTTTAAAAGTGGGGCAGCCTAATGGAGGCTCATTTAACTTCTATCCAACCCATGATGGAACTTTACCTGATGTTTTCTCTTACTCACCTGCTGTTGGGGAAGGCAGTGGGACTGAATTTTCCACTGCAAGTGAGGGTCGCATCACTGGTATCAGAATTTGGGAATACAGTAATAACTATATCTCTGGGCTCCAGCTGATGTACGAGAGTAACTGGACAGCAATGGTTGGTGTAAATTATGGCAATCTAATGGAGATGAAACTCTATGACAAAGAATCTATTATTCAGATCTCTGGAAAGTATGACTCTAGTTACATTTATGAGCTTGTGTTTGTCACCAATCATGGGCGCTTCTTTCAAGTGGGACAGTGTAGAGGGGTCTCATTCAACTTCTTTCCAACCCAGAAAGGAAGTGAGCTGCGTTTCCTCAGCGGTCGACAGAATGGATGGGGCATCACCTCTATTGGGGCTCATTGGGCCTTGGTTCGTAACTATGCCACATTTGTGAAAATGATTTACTAATATTATAGCCTTGAAATTAATTGGTTAATTTTATCTTTTCTAATTCTACACTAATGCAACTTTACTATAATGTACAGATAAAAGATGAATCATGTACTTGAATATCTGATCATTTGATTGTTTAACCTGTACTATGTTCAATGAGTATGCTTATATGAAGGAAGTTTGTTTCTTTCAGTAAATTGTTTTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_09897221_09902690.mRNA True 1455 mRNA 0.38 5 9896846 9902882

Neighbor

gene id symbol gene type direction distance location
CI01000016_09868120_09886212 NA coding upstream 10613 9868076 ~ 9886233 (+)
CI01000016_09796196_09842235 NA coding upstream 54270 9795950 ~ 9842576 (+)
CI01000016_09788926_09791625 SDC2 coding upstream 104923 9788926 ~ 9791923 (+)
CI01000016_09748780_09759954 MRS2 coding upstream 136463 9748780 ~ 9760383 (+)
CI01000016_09731997_09734823 NA coding upstream 162023 9731997 ~ 9734823 (+)
CI01000016_09934128_09954587 NA coding downstream 31246 9934128 ~ 9955328 (+)
CI01000016_09970010_09999304 NA coding downstream 67033 9969915 ~ 10000721 (+)
CI01000016_10042324_10051398 CTNNB1.L, CTNNB1 coding downstream 139134 10042016 ~ 10052367 (+)
CI01000016_10333877_10334229 NA coding downstream 430995 10333877 ~ 10334346 (+)
CI01000016_10339126_10370881 TRAK1 coding downstream 432376 10335258 ~ 10372651 (+)
G99040 NA non-coding upstream 32623 9864003 ~ 9864223 (+)
G99034 NA non-coding upstream 39998 9856512 ~ 9856848 (+)
G99024 NA non-coding upstream 110283 9785610 ~ 9786563 (+)
G99023 NA non-coding upstream 123622 9769865 ~ 9773224 (+)
G99022 NA non-coding upstream 127122 9765978 ~ 9769724 (+)
G99062 NA non-coding downstream 17385 9920267 ~ 9920479 (+)
G99063 NA non-coding downstream 18299 9921181 ~ 9940824 (+)
G99281 NA non-coding downstream 165362 10068244 ~ 10068606 (+)
G99283 NA non-coding downstream 167023 10069905 ~ 10070116 (+)
G98288 NA other upstream 894129 8996098 ~ 9002717 (+)
G97824 NA other upstream 1881071 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 2111123 7783987 ~ 7784996 (+)
G96389 NA other upstream 2735556 7160641 ~ 7161290 (+)
G99041 NA other downstream 21536 9924418 ~ 9925654 (+)
G99410 NA other downstream 331518 10234400 ~ 10236851 (+)
G99456 NA other downstream 391509 10294391 ~ 10298904 (+)
G99940 NA other downstream 1768763 11671645 ~ 11672873 (+)
G100178 NA other downstream 2257759 12160641 ~ 12162845 (+)

Expression


Co-expression Network