CI01000016_09934128_09954587


Basic Information

Item Value
gene id CI01000016_09934128_09954587
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9934128 ~ 9955328 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_09934128_09954587.mRNA
ATGGCGTTGAATGAAAATGCTGATGGAGAACAACAGACGGACACACGGAGCTTGGAGGGAGACACAGAGCTGGAGACTGGAGACAAGGAACAGGAGACTGGAGATCGGAGACTGGAGATCGGAGACTGGACAAACAGCAGGCTTCAGTTGCAATATAACGGTAACTGGACAGCACTGGTTGGCATGAACGGTTATGGCAATGAAAAGGAGATGACGCTCTTCGACAACAAATATTTTGTTCAAGTCTCTGGAAAGTATTACTCTGGTTATATCTCTGAGCTTATGTTTGTCACTAATGAGGGGCACTCTTTTAAAGTGGGGCAGCCTACTGGACTTTCATTTAACTTCTACCCAACCCATGATGGAAGTGAACTACGTTTCCTCAGCGGTCGACAGAATGGATTTGCCCTGACCTCCATTGGGGCTCACTGGGCTGTGTTTAACAACAATTCCACTGCATCATAAAGACAGAAATGTTTCACAAATTATGTGCGGAAAATGCCAAGTAGCCTACTTTTTTCTGAGCTCTTGATGATGAAATTTTGGAACTTTCTGAGTAAAATTAATTTACCATTTACTTAATTTAACACTATAAGGAGACTGGTGTAAACTTATTTTATTCCTAATCATGCCTTATGGGCTTCTTTAACACAACAATTCCTAAAGGCTCTCAATAATTTTAGTAAAAAACTTTTTGTGTTATATAACATTTATGAAATCATATTGTTAACCAATATTAACCTAAATGAACTTTTTTAATTATTATTATTAATGACATCACTATGAAGGTTAAAATATAGAGGTAAAAAGAAGGGCATTCTGAAATGCTGGGTGTTACCCTAAAAACCATTATGACCCAAAACTGCAGTGTGGATGATTCTGGACAAACTCTGTACCGAATGTATACATATCCTGGATCTGGATGATTTTAAAACTATTAGACTTGATTTTACTAACTATTAAAGTGATTTTTATTAAAACTTATTAAAACAACTGATATACTTTTTTTCATATGAAGATCGCAATAAAACTGACTTATTAAAATGTTTAACATGCCTTTATCATTTATCTTTGTTACTTTCATCTGCTATGTATAGATTTTATTGTTTACACTTGGCCCAGACTTTCAATCAAACTTTACAAATTCACAATATTTAATACTATGATAATCTAAACCAGGTATGAACTAAACATAAATCCATTCAA

Function

NR:

description
Zymogen granule membrane protein 16 precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_09934128_09954587.mRNA True 1206 mRNA 0.35 3 9934128 9955328

Neighbor

gene id symbol gene type direction distance location
CI01000016_09897221_09902690 NA coding upstream 31246 9896846 ~ 9902882 (+)
CI01000016_09868120_09886212 NA coding upstream 47895 9868076 ~ 9886233 (+)
CI01000016_09796196_09842235 NA coding upstream 91552 9795950 ~ 9842576 (+)
CI01000016_09788926_09791625 SDC2 coding upstream 142205 9788926 ~ 9791923 (+)
CI01000016_09748780_09759954 MRS2 coding upstream 173745 9748780 ~ 9760383 (+)
CI01000016_09970010_09999304 NA coding downstream 14587 9969915 ~ 10000721 (+)
CI01000016_10042324_10051398 CTNNB1.L, CTNNB1 coding downstream 86688 10042016 ~ 10052367 (+)
CI01000016_10333877_10334229 NA coding downstream 378549 10333877 ~ 10334346 (+)
CI01000016_10339126_10370881 TRAK1 coding downstream 379930 10335258 ~ 10372651 (+)
CI01000016_10421936_10422623 NA coding downstream 465247 10420575 ~ 10424516 (+)
G99062 NA non-coding upstream 13649 9920267 ~ 9920479 (+)
G99056 NA non-coding upstream 34049 9899553 ~ 9900079 (+)
G99040 NA non-coding upstream 69905 9864003 ~ 9864223 (+)
G99034 NA non-coding upstream 77280 9856512 ~ 9856848 (+)
G99024 NA non-coding upstream 147565 9785610 ~ 9786563 (+)
G99281 NA non-coding downstream 112916 10068244 ~ 10068606 (+)
G99283 NA non-coding downstream 114577 10069905 ~ 10070116 (+)
G99284 NA non-coding downstream 114791 10070119 ~ 10070348 (+)
G99287 NA non-coding downstream 119022 10074350 ~ 10074666 (+)
G99041 NA other upstream 8474 9924418 ~ 9925654 (+)
G98288 NA other upstream 931411 8996098 ~ 9002717 (+)
G97824 NA other upstream 1918353 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 2148405 7783987 ~ 7784996 (+)
G99410 NA other downstream 279072 10234400 ~ 10236851 (+)
G99456 NA other downstream 339063 10294391 ~ 10298904 (+)
G99940 NA other downstream 1716317 11671645 ~ 11672873 (+)
G100178 NA other downstream 2205313 12160641 ~ 12162845 (+)

Expression


Co-expression Network