CI01000016_10089136_10135299


Basic Information

Item Value
gene id CI01000016_10089136_10135299
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10088716 ~ 10135299 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_10089136_10135299.mRNA
GAGCACCAGAATAACACAGTTGGCAACACGATGCAGAACGCCATGGCTCTCCTCAGCAATTTGATTGGACAGAAGGGCACGGACCTCCGACCGTTCTACCAGCAAGGTGTAATTGAGGTGGTGAGTAACGTCTTTGTGGAAGTCTCTGGCATGTATCTGGAGAAAGAAATGCACTCAGGGCTGAAGAGCTGCTCTTCTCTGCTCCTGTGTCTGCTGGACATCATCCACTGCCTGCTCAAAAACCTTTCATCTGTAGTCCGACTGGCCCTCCAGAGATCAGACAGTAATGAAAACACTGAGGCTGCAGAGGAACTACTACTCATCAACAAGCCACTGACAGACCTAAACAACCTCCTCATTCAACTGGTCACCCACAGTCCCATTAGACTCCTCAGCCTGATTTCCCCGATGCATCTACAAGCCCTGCTAAGTAAACAGGGTGGATTTGGGAGGCCGTCTAAGCAGCTGGCGTGTAATGACAGTGAGGTGTATGAGGAGGCCAGTCACTGTGTTTCTCTGCTGGCTCAGCTGTATGGAGGAGACGGCGCGGACCGCCTGCAGCCGGAGGAGCTGCTCAGCCTGGCACACGCACTGCAGATGCACACTGAGCCCAGACAGCAGAAATTGCTGCTCCGCGTGCTGAAACGATTGGTGAGTGTATGCAAAATCTGATCTGAGACCAGCTGAGCTGTACTCATGAATGCAATGTGAATGATCGTTGCAGTAAAAGCAAAAAAAAGTGTGATATTGGATATGATTTAAAATATGATACCGAATGGCTAAGCCATTTTTGAAGCATATTTTAAGTAGCTAAATTTTTACACTACACTAAACGGAGGACTTGTTATACTTTTTTAATTTTACCTTCCCTTTAGTGTTTAATATAGCTGTTTTTGCATGTAAACAATTGGCAAAGTTGCAAAGGGGCCCAGGGGCAGACTGGCCATCTGGAGCACCGGGAGTTTTCCAGTGTTCTGGTGTGAAGATGGATGGATGGATGGATGGATGGATGGATGGCGTAGCCCATCCTTCCTTCAGCACGTTCTAAGCGGTAGACCGGTCACAACACACTTTGGCAGGCTAAACATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_10089136_10135299.mRNA True 1092 mRNA 0.48 5 10088716 10135299

Neighbor

gene id symbol gene type direction distance location
CI01000016_10025722_10027148 NA coding downstream 61457 10025502 ~ 10027259 (-)
CI01000016_09959197_09962175 NA coding downstream 125531 9957922 ~ 9963244 (-)
CI01000016_09739013_09746676 NA coding downstream 342040 9739013 ~ 9746676 (-)
CI01000016_09654611_09661197 NA coding downstream 427519 9653502 ~ 9661197 (-)
CI01000016_09638800_09651752 CEP76 coding downstream 436964 9638592 ~ 9651752 (-)
CI01000016_10228314_10299064 ULK4 coding upstream 93015 10228314 ~ 10299064 (-)
CI01000016_10386099_10386648 NA coding upstream 250526 10385825 ~ 10387482 (-)
CI01000016_10443526_10488009 NA coding upstream 307546 10442845 ~ 10488186 (-)
CI01000016_10571262_10572444 NA coding upstream 435406 10570705 ~ 10573868 (-)
CI01000016_10600154_10633808 TRIM71 coding upstream 463903 10599202 ~ 10633808 (-)
G100236 NA non-coding downstream 5083 10083319 ~ 10083633 (-)
G100235 NA non-coding downstream 5681 10082800 ~ 10083035 (-)
G100224 NA non-coding downstream 55440 10033014 ~ 10033276 (-)
G100217 NA non-coding downstream 66938 10021503 ~ 10021778 (-)
G100216 NA non-coding downstream 67616 10020803 ~ 10021100 (-)
G100256 NA non-coding upstream 549 10135848 ~ 10136074 (-)
G100278 NA non-coding upstream 62419 10197718 ~ 10198034 (-)
G100283 NA non-coding upstream 96363 10231662 ~ 10232146 (-)
G100286 NA non-coding upstream 105002 10240301 ~ 10240525 (-)
G100287 NA non-coding upstream 105887 10241186 ~ 10241465 (-)
G100190 NA other downstream 36327 10051168 ~ 10052389 (-)
G99178 NA other downstream 273761 9814361 ~ 9814955 (-)
CI01000016_09510177_09512196 ID4 other downstream 576288 9509622 ~ 9512428 (-)
G98691 NA other downstream 831105 9256102 ~ 9257611 (-)
G98679 NA other downstream 848787 9234996 ~ 9239929 (-)

Expression


Co-expression Network