CI01000016_10333877_10334229


Basic Information

Item Value
gene id CI01000016_10333877_10334229
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10333877 ~ 10334346 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_10333877_10334229.mRNA
ATGTGTGTAACAGCACTGATCTTCCTGAGGTGGAAATCATCAGTTTGCTTGAGGAGCAGTTGCCTCATTATAAGCTGAGAGCTGACACAATATACGGCTATGACCACGACGACTGGCTCCACACGCCTCTCATCTCACCCGACGTCAACCTCGACCTGACCACAGAACAGATCGAGGAGACCCTCAAATATTTCCGTAAGCCCAGAATCACTCACTATCATCCTGTTCCTCTATTTTTCTCTCTTTCATCCACTGTTTTTCCTGTGTCTTTCTCTGTCACCCATGAAGTTGTCTTTTCCCTTGACACTGTTTTACTCAAAATAGTAACAACAAATATCTCACACATGCACTGACACACATACGCATAAACATCACATAAACACCATTCATGCATGCTTTAACAGTGCTTTTACATATTGAACATGCATTGGTTGAACATGTGCTCAATAATTAATTTCAATAAGCCTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_10333877_10334229.mRNA True 470 mRNA 0.42 1 10333877 10334346

Neighbor

gene id symbol gene type direction distance location
CI01000016_10042324_10051398 CTNNB1.L, CTNNB1 coding upstream 281510 10042016 ~ 10052367 (+)
CI01000016_09970010_09999304 NA coding upstream 333156 9969915 ~ 10000721 (+)
CI01000016_09934128_09954587 NA coding upstream 378549 9934128 ~ 9955328 (+)
CI01000016_09897221_09902690 NA coding upstream 430995 9896846 ~ 9902882 (+)
CI01000016_09868120_09886212 NA coding upstream 447644 9868076 ~ 9886233 (+)
CI01000016_10339126_10370881 TRAK1 coding downstream 912 10335258 ~ 10372651 (+)
CI01000016_10421936_10422623 NA coding downstream 86229 10420575 ~ 10424516 (+)
CI01000016_10508464_10510408 NA coding downstream 174118 10508464 ~ 10510832 (+)
CI01000016_10587199_10588775 CNOT10, CNOT10.L coding downstream 252853 10587199 ~ 10588775 (+)
CI01000016_10676271_10682495 NA coding downstream 341741 10676087 ~ 10682839 (+)
G99455 NA non-coding upstream 34265 10299359 ~ 10299612 (+)
G99454 NA non-coding upstream 41368 10292300 ~ 10292509 (+)
G99453 NA non-coding upstream 42585 10291067 ~ 10291292 (+)
G99451 NA non-coding upstream 47056 10286566 ~ 10286821 (+)
G99449 NA non-coding upstream 51270 10282363 ~ 10282607 (+)
G99461 NA non-coding downstream 51492 10385838 ~ 10386651 (+)
G99484 NA non-coding downstream 139635 10473981 ~ 10474743 (+)
G99362 NA non-coding downstream 182128 10516474 ~ 10522566 (+)
G99365 NA non-coding downstream 236356 10570702 ~ 10572556 (+)
G99379 NA non-coding downstream 259689 10594035 ~ 10594264 (+)
G99456 NA other upstream 34973 10294391 ~ 10298904 (+)
G99410 NA other upstream 97026 10234400 ~ 10236851 (+)
G99041 NA other upstream 408223 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 536937 9795950 ~ 9842576 (+)
G98288 NA other upstream 1331160 8996098 ~ 9002717 (+)
G99940 NA other downstream 1337299 11671645 ~ 11672873 (+)
G100178 NA other downstream 1826295 12160641 ~ 12162845 (+)

Expression


Co-expression Network