CI01000016_10386099_10386648


Basic Information

Item Value
gene id CI01000016_10386099_10386648
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10385825 ~ 10387482 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_10386099_10386648.mRNA
AGACACACACTTGTTTTGCAGTCAGCGTGTGTTCTCCATCTCTCTCTCTCCTCCTCTCTGCCAGAGTTTCACCTGAAGGTATGAACCTAATTTTGTTCTTAGTTTTGAATGTGGAGTGCTGCATGCTTAAACCGGCTGTTGCGTTTACTGTGTGAAATCATGTCTTTTTTTTAACAGGTGTAAAATATATTATAAAATATTTAAAATGTGTACTCATGCTGCATGTCCTAAAATTTTGATATTTAATTTGTAGATTTTAATGAAAACAAAGAAGATATGAAGCGTTTGAATGAGATTCACTAGTGATGCAGTTTCTAGTTTGCTGTAATTATTGAGAAATTTAATCCATTTTAAATTCCTATTGCTGTTGCTGATGCTTCTTGGCTCGAATCCAGTTAGGGATATTTTTTCCTCTCCAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAAAGAAAAGGCAAATTAAAAAAAAAAAAAAAAAAAAAAAAGGCAAATTTTGGAACCCAGAAACAAATAAGACAGACCTCTTGGTGAAATGGGTTTTATTTAAACCTTGTGTACTAAACAGAAAAACATGAAGAGTTTAGATCTACCCAGATTACAAATTTTATTTAGTCCATCTACCAGGTGTTTAATACAAATGTATTAACACTCTTTTGAGGCAGGAAAGACCATTTTATTTTAGCAATCATTATTATTTAGTTTGTTGGTGGATTTTAATGTTTGATTTTTGAGGTAAAATCATTTAGAAAGCAGTTAGTCTTACCATAAAAATGTATGTAATAGGATTAAAAAGCAATATCAAAGCTCTAACATGTGCGTGTATGTTTCAGCTATGAACACTGGAATCTGTGTGTGCGTGCTGCTGGCTGCCCTCTCCACCAGCAGTTGCATTTCTCTCCATACACAATCAGAAGATGGGGTTCAGTCTGATCTCGGTACCATAGTGGAACACACACGCCACACCCGTGCAGCGCCCTCCAGTGGACAACTGAGCCTGCTGTCTAAACAAGAGGATGAGGAAGAACCCCGCAGCAGCTTGACTGAACTACTGGCCAGAATCATCTCCACCAAAGGTACATACCGCAGAAGTTCCTCTCCGAATAGCAGGTCCATGGGCTCCACTCACAGAATAAAGGACAGAGATTACCTGGGATGGATGGATTTTGGCCGACGGAGCGCAGAGGAGTATGAATACTCCTCATAAGACCCATTCAACCACTTACATGAATCAACCTGATTAGCCAATCATCTGTACAGAGTCACCCATTTCAATGTCAATCAATCACAGTCTGAGCTCGGTCTGATGTAAATTTGTTTGTACAATGGAGATGATGCAATATATGAATACGTGTGTCCATCTATATACATTTATTTTGCAGAAAAAAACGAGTGAGAATGTAGTCTCTACTGCTTTTATTCTCGTAACTCATGTATATATGATTTTGTCCTATGACATATCACAGATGTCTATGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_10386099_10386648.mRNA True 1480 mRNA 0.37 2 10385825 10387482

Neighbor

gene id symbol gene type direction distance location
CI01000016_10228314_10299064 ULK4 coding downstream 86761 10228314 ~ 10299064 (-)
CI01000016_10089136_10135299 NA coding downstream 250526 10088716 ~ 10135299 (-)
CI01000016_10025722_10027148 NA coding downstream 358566 10025502 ~ 10027259 (-)
CI01000016_09959197_09962175 NA coding downstream 422640 9957922 ~ 9963244 (-)
CI01000016_09739013_09746676 NA coding downstream 639149 9739013 ~ 9746676 (-)
CI01000016_10443526_10488009 NA coding upstream 55363 10442845 ~ 10488186 (-)
CI01000016_10571262_10572444 NA coding upstream 183223 10570705 ~ 10573868 (-)
CI01000016_10600154_10633808 TRIM71 coding upstream 211720 10599202 ~ 10633808 (-)
CI01000016_10637748_10650217 TCAIM coding upstream 250157 10637639 ~ 10650217 (-)
CI01000016_10740961_10745890 ABHD5A, ABHD5 coding upstream 352464 10739946 ~ 10745890 (-)
G100324 NA non-coding downstream 33695 10333883 ~ 10352130 (-)
G100302 NA non-coding downstream 98334 10287251 ~ 10287491 (-)
G100301 NA non-coding downstream 98630 10286979 ~ 10287195 (-)
G100298 NA non-coding downstream 117653 10267886 ~ 10268172 (-)
G100296 NA non-coding downstream 119156 10266451 ~ 10266669 (-)
G100378 NA non-coding upstream 87769 10475251 ~ 10476135 (-)
G100379 NA non-coding upstream 89500 10476982 ~ 10478852 (-)
G100351 NA non-coding upstream 141934 10529416 ~ 10551424 (-)
G100413 NA non-coding upstream 265261 10652743 ~ 10715678 (-)
G100352 NA non-coding upstream 277947 10665429 ~ 10681706 (-)
G100190 NA other downstream 333436 10051168 ~ 10052389 (-)
G99178 NA other downstream 570870 9814361 ~ 9814955 (-)
CI01000016_09510177_09512196 ID4 other downstream 873397 9509622 ~ 9512428 (-)
G98691 NA other downstream 1128214 9256102 ~ 9257611 (-)
G98679 NA other downstream 1145896 9234996 ~ 9239929 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_009665 ccka coding NC_007127.7 CM002900.2 5774977 ~ 5779201 (+)