CI01000016_10443526_10488009


Basic Information

Item Value
gene id CI01000016_10443526_10488009
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10442845 ~ 10488186 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_10443526_10488009.mRNA
AGATTATATGATAAGAAATTTCAATGTAATGCCAAGCCAATCCAATAATGTTAACACCAACTTGAAATTCATTATGAACACATGGGAGTCTAGGATCATGTTTTAATTATTATTATTATTATTATGTAATTGTGCGTAAATAGTACAATTCCGACAGCCAGAACGATGCTGACCTAAATGAAGATAAATGTCTTAGCATCTGCCGTGTTTATTGAACCAATCAGAATAGAGAGTCAGCGAGAAGCTCATTTGATTGGCCACAAGAAGAAGGACCCGCCTTCCTCTTCACACTTGCAAAACTCAGTGAGTGAGAGAATCATGCCAAAACTGGAGTTGTTGACTGCACAACAGAATGATCCTGGGTTACAGCAATTGTTTGAGGATGTTATTCCAACCCAGGAGAATCTCAATATCATCTTTGCCTGTGGCAGTAATAATGGAGGGTTCTTCTTCCGAACTGCAATGCTCTCAAATAATACACTGGAGATTACAAATAAACTTAATGTAACCAATATCCAGGGTTTGATAGAGTCAAGCTTGATACAGTGTGTTTTCAACATCCCCATTAATGGAATCGTCATCAGTTTCCTAAGCAATGCCAACGTCACAAATTTCAAAATCAGCAACAAGTTTAATGTATTCCTTGACATCTTGAAGGGTTCAACCAGTGGTAAGTTTGTTTATATTTCAACACATTACAGCGTATTCTCCCGTTTCCTGCATTCTCCAAGATCTACCCCGTTTCTCCTGAAGAAAGACTCCGTCCATTACCTTCCTACCGCTGTATCCATGTCTGCTGGATATTTCCCCGATTCACGAGCTGCGTGCCCTGTTTCAGTCTATAGTCACAGCAGCTACAACTATCAGAGGAAGATCAGCAAAACACTCCCAGAAGACATGGAGAGTAAGCTGATGATTTTAGTGGTTTGTATGATTGGCTGTGCAGTGTCTTGCATTAAGGCTCATGACTACCCATCAACAAATTTGACTTCCAAAATCACCAACAATGAGTGTGGAAAAACCAAACAGTGTTTGGACAGCCCTGAAGGATGTGATCCTTCGGGTAGCTCTCAGTGTTTCTTCACCTCAGTTACCTTAACTAACATCAGCATTACGGTTGAGCTCAGTGGCAGCTCTACCGGTTACATCGCTTTAGCAGCTGGACTGACATCTAATGTGTCTCAGCCTAATGTAACCAATATCCAGGGTTCCATACAGTCAAGCTTGATTCAGTGTGTTTTCAGCATCCCCATTGATGAAAAAATCACACCCTACCTAAGCTATGTCAGCGGCTCACATTTCAACGCCAGCGACATTGCTAACTCCCACATTCCCGTATTCCTTGACATCTTTAATGGTTCAACAAATGGAACTGAGCTGGGAACACCAACAAGTGTACTTCAGTCATCTGTCCTGGTTAATCTAACCAACGTGAATTCTACTAATGTTGTAATCACCCCAGCTAGCACCCCAGCTAGCACTCCAGCTAGCACCCCATCTAGCACTCCAGCTAGCACCCCAGCTAGCACCTCAGCTAGCACTCCAGCTAGAACCACAGCTAGCACCCCAGCTAGCACTCCAGCTAGAACCACAGCTAGCACTCCAGCTAGCACCCCATCTAGCACTCCAGCTAGCACCCCAGCTAGCACCTCAGCTAGCACTCCAGCTAGCACCCCAGCTAGCACCCCAGCTAGCACTCCAGCTAGAACCACAGCTAGCATTCCAGCTAGCATTCCAGCTAGAACCACAGCTAGCACCCCATCTAGCACCCCATCTAGCACTCCAGCTAGCACCCCAGCTAGCACTCCAGCTAGAACCACAGCTAGCACCCCAGCTAGCACTCCAGCTAGCACTCCACCTCATTCAAATGCCAGCATCTCACTCACCAGTCATGGAACTGAGCTGGGAACACCAACAAGTGTACTTCAGTCGTCTGTTCAGGTTAATCTAACTGATGTGACTTCTACTAATGTTGTAAGCACCCCAGCTAGCACTCCAACTAGCACCACAACTAGCACCACAACTAAGACCACAACTAAGACCCCAGCTCATTCAAATGCCAGCATCTCATTCACCAGCCTATTGAGTCATGCTGCAATTTGCTTTCTTAGCATCTTCTTGCATCTGATCTGATGAGACCCGAGAGAGACCTGAGGACTAATCATGCTTTAGAGTAGTATATGAATATGTAGTAACGTTGACATGTTTGCCAAAAATATTCTTATTTCTATTGGCTTCTTTCCTTGTCTGATTCTTGATTATTCACAAATACAGTCAAACCAAAATTTAGTCAGACACCTTGAACATTTCATTCATTAATACAGTTTATTCACTATAGTTTAAAAAAAAAAGGTAATAAAAAATGACAAGATCTCAGAGTTAAACTGTCAGAAAAAAATAATCTTAATTATGTCAGATAACACTTAAGCAAAACATGGTCAGGTCAAAGTGTCTGAATAATTTTTGGTTTCAAATTTTTATCAATTTTAATGGTAGTCCACTGTATAAAGAATTTTTGGGTATAATATACCACAGTTTACCTTATTTTACTATCCTCACTTACATAGTGTCTTCTACCCACTAGTCAAAATATATAAAAAATGTCTGGTTCAAAATGTTTTGGTTTGACTGTATATAAAAAACCTACTTTTAATTGACATATACATGGTGTTAGGTATGTTATCCACATAAAAATCCTACTTTTTTTGTTGTGGTGTTTTAATGATTTTCTAACATTGTTTACTGATAGTGGAAATGATCAATTTAATGAAAATTTAAACTTGTATTTTGAAAACAATTTGAAGTTATATTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_10443526_10488009.mRNA True 2814 mRNA 0.41 12 10442845 10488186

Neighbor

gene id symbol gene type direction distance location
CI01000016_10386099_10386648 NA coding downstream 55363 10385825 ~ 10387482 (-)
CI01000016_10228314_10299064 ULK4 coding downstream 143781 10228314 ~ 10299064 (-)
CI01000016_10089136_10135299 NA coding downstream 307546 10088716 ~ 10135299 (-)
CI01000016_10025722_10027148 NA coding downstream 415586 10025502 ~ 10027259 (-)
CI01000016_09959197_09962175 NA coding downstream 479660 9957922 ~ 9963244 (-)
CI01000016_10571262_10572444 NA coding upstream 82519 10570705 ~ 10573868 (-)
CI01000016_10600154_10633808 TRIM71 coding upstream 111016 10599202 ~ 10633808 (-)
CI01000016_10637748_10650217 TCAIM coding upstream 149453 10637639 ~ 10650217 (-)
CI01000016_10740961_10745890 ABHD5A, ABHD5 coding upstream 251760 10739946 ~ 10745890 (-)
CI01000016_10799559_10842613 SNRK, SNRKA coding upstream 310999 10799185 ~ 10843409 (-)
G100324 NA non-coding downstream 90715 10333883 ~ 10352130 (-)
G100302 NA non-coding downstream 155354 10287251 ~ 10287491 (-)
G100301 NA non-coding downstream 155650 10286979 ~ 10287195 (-)
G100298 NA non-coding downstream 174673 10267886 ~ 10268172 (-)
G100296 NA non-coding downstream 176176 10266451 ~ 10266669 (-)
G100351 NA non-coding upstream 41230 10529416 ~ 10551424 (-)
G100413 NA non-coding upstream 164557 10652743 ~ 10715678 (-)
G100352 NA non-coding upstream 177243 10665429 ~ 10681706 (-)
G100350 NA non-coding upstream 248362 10736548 ~ 10736879 (-)
G100346 NA non-coding upstream 248767 10736953 ~ 10737372 (-)
G100190 NA other downstream 390456 10051168 ~ 10052389 (-)
G99178 NA other downstream 627890 9814361 ~ 9814955 (-)
CI01000016_09510177_09512196 ID4 other downstream 930417 9509622 ~ 9512428 (-)
G98691 NA other downstream 1185234 9256102 ~ 9257611 (-)
G98679 NA other downstream 1202916 9234996 ~ 9239929 (-)

Expression


Co-expression Network