CI01000016_10508464_10510408


Basic Information

Item Value
gene id CI01000016_10508464_10510408
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10508464 ~ 10510832 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_10508464_10510408.mRNA
TAGGGTGAGAGATGATGTGATGAGATCTGTGCAGGCCCCTCTGACTTGCAGAGCCTCCAATTGTCAGACCCACATCAGCCAGCATGAAACAGAAGCAGCTCTGCAGACACACACACTTCTGGAGGAGACTGGGGACTTGCAGCAGGATTCACACCAACCAATGAATGATGTCCTGAAGAGAATCAAAGAGACTCACAAAACCAGCATGAAGAACAGGTATGAAAGCTTATATGAGGGAATCAAACTACAGAAGAATCAGACCTTCTTGAACAGGGTTTACACACAGCTATGCATCATAGAGGGAGAGAGTGAAGGGGTGAATGAAGAACATGAGGTTTTACAGATGGAGAAAACATCCAGAACACAACACTTACAAAACACTCACATCAACTGCAATGACATCTTTAATCCATTACCTAAATCAGGAAGTGTGGAGAGGAAAGAGCACATAAAGACTGTTATTACTAAAGGCATCGCTGGAATTGGAAAAACAGTCTCTGTTCAGAAGTTCATTCTGGACTGGGCCGAGGGAAAAGCCAACCAGGATGTAGATTTCATGTTTGTGCTTCCATTTCGAGAGCTGAATTTGATTGAAGATGTCCAGTACAGTCTTCACAGACTTCTGCTTGACTTTTATCCTGAAATTCAAGATCTCGATTCAAAGATTTATGAGGAGTGTAAAATTGTGTTCATCTTTGATGGTCTGGATGAAAGCAGAATTACACTAATGTTTTCAGACAGTGAGAATGTTTCTGATGTGGCTGAGGCTTCATCAGTGGGTGTGTTGATGTCAAACCTTATAAGAGGAGAGCTGCTTCACTCTGCTCTGATCTGGATCACCTCCAGACCAGCAGCAGCCAATCAGATCCCCTCAAATTACATTAACCGTGTGACAGAAATTCAGGGATTCACTGATCCCCAGAAGGAGGAATATTTCAGGAAGAGAATCAATGATCAGCATCAAGCTACCAGAATTATCTCACACGTTAAAAGATCAAGAAGCCTCCATATCATGTGTCACATACCTGTCTTCTGCTGGATCTCAGCCACTGTGCTTCAAAACATCCTCAAACAAGATCCCAGTTCAGAAATCCCTAAAACTCTGACTGAAATGCACATCCACTTCCTGCTCATCCAGATAAATATGATGAATCAGAAGTATGAGAGAGACCCAGAGAAACTCCGGCAGTCCAACAGAGAAGTGATGGTGAAACTTTCTGAACTGGCTTTCAATCAGCTGATGAAGGGCAATGTGATGTTCTATGAGGAGGACCTTAGAGAGAGCGGCATAGACGTCACTGACGCCTCAGTGTATTCTGGGATTTGCACTGAGCTCTTCAAGGAGGAAACTGGGATTCATCAGAGGAAAGTCTACTGCTTCATACATCTGAGCTTTCAGGAATTTCTGGCTGCTTTCTGTGTGTTTTATCATTATGTGATCAAAAATTCTAATGCATTGCAGTTTTTTGATGTAATGCATAGTCTCCAGAAGGAAGCAGTAAAGAAATCTCTGCAAAGTAAAACTGGACACCTGGATCTTTTCCTTCGATTCCTGCTGGGCATCTCACTGGAGTCCAATCAGAGACTCTTACAGGATCTACTGACACACACAGTGAACAGTTCAGAGACCATCAGAGAAACCACTACCTACATCAAAGGCAAAATCGAGAGCGACAAACATCTGTCAGCTGAAAGATCCATCAATCTGTTTCTCTGTCTTCTTGAAGTGAATGATCAGAGTCTGCTCAAAGGGATTCAGAAGTTTCTGAAATCAGAGAAACACTCAGTGAATAAACTCTCTGCTGCTCACTGCTCAGCAATAGCCTACATGCTACAGATATCAGAGGAAGTGCTGGATGAGTTTGATCTGAAGAAGTACAAAACATCAGAGGAGGGTAGAAGGAGACTGATACCAGCTGTGGGGAACTGCAGAAAAGCTCTGTGAGTTATTAATTCTAATATTGTTGTCATTATGACTGATATTTTTTTTTCTTTTATTTAATTTTAAATTGATTTTATAGCATTTTTCACAATACACATTTCACGAGTCAGCTTTACAGACAATAGTGCCTTACCTACAGTGAGCAAGACAAAGGCAAAAATGGCAAGGAAAATCTCCCAAAGATGTTTAGGTAGCACATTCACTGTGTCTTTCTTTACTTACACTGCCACACTAGAAACAGGGTTGGGCAGAATTAGGGGCACCAAAACTATCCCGAACAATTTAAGCCCTCGTCCTGTTGGCCAATATTAAAATATGTAGGCCTAGTTTACCTCTTTTGACTCACATTAAAAGCACATTTCTAAAATAAGCCATTCTCTTTCCTTTTAGCATCTGATGTTATTTCTAACAAGTATTTGCCCTCGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_10508464_10510408.mRNA True 2369 mRNA 0.42 1 10508464 10510832

Neighbor

gene id symbol gene type direction distance location
CI01000016_10421936_10422623 NA coding upstream 83948 10420575 ~ 10424516 (+)
CI01000016_10339126_10370881 TRAK1 coding upstream 135813 10335258 ~ 10372651 (+)
CI01000016_10333877_10334229 NA coding upstream 174118 10333877 ~ 10334346 (+)
CI01000016_10042324_10051398 CTNNB1.L, CTNNB1 coding upstream 456097 10042016 ~ 10052367 (+)
CI01000016_09970010_09999304 NA coding upstream 507743 9969915 ~ 10000721 (+)
CI01000016_10587199_10588775 CNOT10, CNOT10.L coding downstream 76367 10587199 ~ 10588775 (+)
CI01000016_10676271_10682495 NA coding downstream 165255 10676087 ~ 10682839 (+)
CI01000016_10748252_10749230 NA coding downstream 237420 10748252 ~ 10749343 (+)
CI01000016_10756608_10758149 NA coding downstream 243561 10754393 ~ 10758201 (+)
CI01000016_10760640_10783664 ANO10A, ANO10 coding downstream 249808 10760640 ~ 10783859 (+)
G99484 NA non-coding upstream 33721 10473981 ~ 10474743 (+)
G99461 NA non-coding upstream 121813 10385838 ~ 10386651 (+)
G99455 NA non-coding upstream 208852 10299359 ~ 10299612 (+)
G99454 NA non-coding upstream 215955 10292300 ~ 10292509 (+)
G99453 NA non-coding upstream 217172 10291067 ~ 10291292 (+)
G99362 NA non-coding downstream 5642 10516474 ~ 10522566 (+)
G99365 NA non-coding downstream 59870 10570702 ~ 10572556 (+)
G99379 NA non-coding downstream 83203 10594035 ~ 10594264 (+)
G99498 NA non-coding downstream 94136 10604968 ~ 10606304 (+)
G99364 NA non-coding downstream 118631 10629463 ~ 10632125 (+)
G99456 NA other upstream 209560 10294391 ~ 10298904 (+)
G99410 NA other upstream 271613 10234400 ~ 10236851 (+)
G99041 NA other upstream 582810 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 711524 9795950 ~ 9842576 (+)
G98288 NA other upstream 1505747 8996098 ~ 9002717 (+)
G99940 NA other downstream 1160813 11671645 ~ 11672873 (+)
G100178 NA other downstream 1649809 12160641 ~ 12162845 (+)

Expression


Co-expression Network