CI01000016_10676271_10682495


Basic Information

Item Value
gene id CI01000016_10676271_10682495
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10676087 ~ 10682839 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_10676271_10682495.mRNA
CTATAAAAATAGCTCAATTAAACCTCAATCAAACTCAGCCTTGTCAAACAGAACTAATATTATCTTTGTCATAATAATTACGAAAATTTCCCACCAATAACTCCCGTGGTGATACCTCACCTTTTGATATGGAAATAGGCGAACACGGATTCGGCACGTTTCCGCTAGGCAGTTGAGAAGGACAATGAGAGGAGGGAGAAACGGAGGAGAGAAAGAGAGAGCGGAAAGGCCAGACAGCCCCTCTGTAAATGAGTGTGATGGAATGTGGGTCTTTGGGAAGCGCTTTACAACTGCCAACATGGTTCGGTCTTGCCACATTATGTGCTGCTCGTTTACAAATTACATTAATTGCCTCTTATACAAGAAAAAACCAACAGTGTTACACAACCCCTTGCAGACACACAGCTTAGGTAAATCCTCACGGTTAGTCCAGCATTTGGTTGCGTACGGCACCACACCCAAAGCCACAGTCAACACGAAGAGTCGACTACCGCCTAGGCAAGGTGCCGCCACGGGCAGGGCTAACTGGAGCTCTCTGCATCTATTCTTCCTGCACCTTCGCCTAGATGAAAAGGCGACTTCAATGACTCCAGCTAGTTCTATACTCTCTGCTTTATCTCACCCAAAGGGTTTGCGCAGTGATTTCTGGACAGCATTTGCGGTGTTTCATAAAATTGATCGCATAAAGACAGTGGTGTTGATTGTGTCCCGTCGCTTCCATGAGCTTCCCAGCTCTGATCTCACACACACTCTCTTTCATACTTCCTTCCTCTTGCTCTTGTTCACTAACTATGTTTCTTTCTCCATCCTTGCTTCCTACCTTCACTCACACACTCACACGCTCCAGGAGAATGAGATCGGTAGCCTCACCCTGGCACAGAGAGTAGAGAGACACATGGGAGGGGTGTTTTGTAATCTGCCAGGTTGTACCACCCACGGGAGAGTGCTGACAAGAGGGGGAACGGGAAGAGGGGAGGGAGAGAGGAAGCTACGAGCACTCTCCATCTATACCATCACCGACACCCTCCGTCTGACTGAAATGACATGTCAATGCAGTTACAGTGCGCAGAATGTGTGGCTTCGACTGTGTGTGGCTGCGTTCTTGCATCTGGGTTTGTTGGGTGGGGTTTTCCGCTTTGGCTTTTGAGCGAAAAGAAAACCAGATATCGTCTTAAAAGCACTTTTCTATTCGCGAAGGTTGTTTTTTTATCTGTCGGAAAACGAATGGAACGTGTGCTCGGATCGGCGTGTGAAGATGCATGAATAGCTACATTAGCCATCCCATCACCCATCACTGTCTTCAGCAGTCACTAAAATCAATGACAGAAAAATGTTTGGAGAGATCAGCATAAAAGGTAGTGTTCCTCACGCCATATCTCCATTTCCAGAACTTATCGAATCCGAACTCGATAGGTCAAATCAAAAATGGGCTCAAATTTCAACATGTATGCAGTCAGGATTATAGAGATTGAAACTGATCCCTGGGATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_10676271_10682495.mRNA True 1491 mRNA 0.46 7 10676087 10682839

Neighbor

gene id symbol gene type direction distance location
CI01000016_10587199_10588775 CNOT10, CNOT10.L coding upstream 87312 10587199 ~ 10588775 (+)
CI01000016_10508464_10510408 NA coding upstream 165255 10508464 ~ 10510832 (+)
CI01000016_10421936_10422623 NA coding upstream 251571 10420575 ~ 10424516 (+)
CI01000016_10339126_10370881 TRAK1 coding upstream 303436 10335258 ~ 10372651 (+)
CI01000016_10333877_10334229 NA coding upstream 341741 10333877 ~ 10334346 (+)
CI01000016_10748252_10749230 NA coding downstream 65413 10748252 ~ 10749343 (+)
CI01000016_10756608_10758149 NA coding downstream 71554 10754393 ~ 10758201 (+)
CI01000016_10760640_10783664 ANO10A, ANO10 coding downstream 77801 10760640 ~ 10783859 (+)
CI01000016_10865834_10867561 POMGNT2 coding downstream 182510 10865349 ~ 10867648 (+)
CI01000016_10881609_10887779 NA coding downstream 198622 10881461 ~ 10887897 (+)
G99364 NA non-coding upstream 43962 10629463 ~ 10632125 (+)
G99498 NA non-coding upstream 69783 10604968 ~ 10606304 (+)
G99379 NA non-coding upstream 81823 10594035 ~ 10594264 (+)
G99365 NA non-coding upstream 103531 10570702 ~ 10572556 (+)
G99362 NA non-coding upstream 153521 10516474 ~ 10522566 (+)
G99554 NA non-coding downstream 53357 10736196 ~ 10736496 (+)
G99552 NA non-coding downstream 53748 10736587 ~ 10736879 (+)
G99557 NA non-coding downstream 149431 10832270 ~ 10836628 (+)
G99607 NA non-coding downstream 168218 10851057 ~ 10851280 (+)
G99636 NA non-coding downstream 207919 10890758 ~ 10891261 (+)
G99456 NA other upstream 377183 10294391 ~ 10298904 (+)
G99410 NA other upstream 439236 10234400 ~ 10236851 (+)
G99041 NA other upstream 750433 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 879147 9795950 ~ 9842576 (+)
G98288 NA other upstream 1673370 8996098 ~ 9002717 (+)
G99940 NA other downstream 988806 11671645 ~ 11672873 (+)
G100178 NA other downstream 1477802 12160641 ~ 12162845 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location