CI01000016_11161373_11165449


Basic Information

Item Value
gene id CI01000016_11161373_11165449
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 11159368 ~ 11165449 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_11161373_11165449.mRNA
TTCAGCCAGTCTCACGTTTATCCTTTTCCAGCCAGCCAGTGTTCCTCCAGGGCTGACTGAGGAGTCTGGCTTTTTAAAACTTTGCTTTATGGAGCTGAAAGTGCTGACTGTTATCCAGATTAGTGGAAATATTCAGCGAGGACAGCAGTCAATCAAGAAACAAAATGGATATGAAGAAGATCCAGAGATTACAGCACAGATAGACCGGACTCTTGCTGATCTAGATGCAAATCTGGCAGACATTAATCACTCAGGAGGAGCATCTGTGTTTGATGAAATACCTGTGTCCATTGTTGACGAGGACATTCCAGTTACAACCATTGATGACATTCCTGATGATGACCGGTTCAGCACGAGCGAGTGCGAGGCAGAATTGTTGAGCAGCACGCAAAACATCACCAGCCAAACGTGTACCCCATGTGAAGCTACCAAAAACAAAAACAACAATGCCTGCCTGACAGAGGAGAAACACAGAAGTTCATCTCCAGATATAGAAAAGCAGTCAGAAGTGACTACACTCACAGTTATTGAGAAAACCACAAGTGCATCTCTAACCAACAAGAAGTTGTCACAAGACACTAAGCGCATGGACAATATGGAACAGAAGGCAGTCTTCAGCTCAGAGACTAAGAGTAAAGCTGAAACTGAAGAACTAAAGAGTCAGAAAAACATTGTATCACAGAAGTTCCAAAGTTTTGTGCGTCCTGCTGTTCAGACCGTTCAAAAGGTCCCTGATGAGAAACTCAAATCTGCACCTATGGTCCAGAGGTTCAGTACAGAGCCTGCTTATGAGGATAGGACAACTATTACCAGAGTATTGACAACTCAGGGTAAGATCACCCAAAGTTCAGTCTCTCGCTTTGGAATGAAAACCTTCACTGTCATCCCTCCAAAACCGACTGTGTCCCAGACCAAGCCTACAGGCTCTTTAGTCCTAGGTGCCATTAAGATTGATGAACAGGGCAACATGGTTACAGGAAAACAGATTTCCACTTGCCCAGCAAAAAACAGCAATCCCGATGTGGATACTAGTACAGAAAAATCCCCATTGGACAAAGCCAAAGCCTTTTGGAGCACCACAGAGAAGCAAGACCAATCAACTGCGACCAACCAAGGACCCATTATAAACAATAGAGATACTGATGTGTTCAAACCCTTGATTGTGTCTGGAGTCTCTAAACTTTCACTGGAAACACCTCCCGAGGAAACACACAAAGAGGTCATTATATTGGAAAGGAAGCCCATATCTGTAGTGGCAAGTAAGCCTACATTCCCAGAACCTGCAGAGAATCACTCTTTCACAACTGAAAGGCGTGATCTCTCTTTTCTTGTACCCTCCAGAAGAACCTCCAGCCAATACGTTGCTTCTGCCATTGCTAAAAACAATAGCATTCCCAATACTAAAGTACATATCATGCAGGCACCATCAGAGTCCATTGTTAGTGTCAAAAAACCTGTCAATCAACTGTTAAATAATGAGGTTAGACCTACAAACATACACAAACCTGCTACCACTTTCAAACCCACTGAAAATTCTGTGCCTACTTTTGGACATCTTAAATGCCTGCAAAATTACCCCAGTCATGTTGCAGAAAAGCCGGCAAGTTCTGAGAGGATAAGCAGTATTGAAAAAGGCACTCTGCATGGGGAAGACAGAAACAAATCTCTGGATTCACATCCCTTAAATAACAAAATCCCACCCTCAACACATGTGTCTGCTCACATTAAACACATGGAATCTTCCTCTGAAGAAGCCACATCAATCAATAAGTTCCCAGACACCTCCTCTGCTCAAAAAACGCCAATAGACACCACACGTCCACTTACAAAGAAGCCAGAGTTATACAAATCTGAGATTCCAGCTGAACCAAACCAGGGTAAAGTGTTTGGACCAGTTAAGAAGTTCATGCCTGTTATTTTTAAGCCTGTCCAAAAGGAAACTTCTATCCATAGCTCTCTAATGGAGGCCATTCAGTCTGGAGAGGGCATTGAACGCCTCAGAAAGGTATCTGACATATCTACCAGCTGCACAGTTAAGAAGCCATCTTACAATGATGCAGAGAACGAGCGTTCTGCACTTCTTTCAGCAATAAGAGCTCCAAGCAACTCTGCCAGACTGAAGAAGGGAATTTGCGTGATCATCTTGAACCCGATCTGAAGTTATCTCCTATTGAGACAACCAAATTTTCAATCATAAAGTTTTGCCATCCAACTGTAAATGTTAGGGATGCACCGATCCGTCTTTTTTGCTTCCGATACTGATTCCGATACCTGGGATTCAGTATCGGCCGATACCGATCCAATATTCAAGTAATAATAAAAAAAAGTTAAATTAAATTGCTAAATTACCTAATAAACTGTATGCCTCACTGTGTGGAAGAAACTGGGATCATTCTTTTGTGCAAGGCATCAGGCTTGACTTAAACATTACTTTCCTAACTTTGTAAAACAAAATAACAAACAGACACAAATGTAGTGAATTATTTATTAAATAATTGTGAATCAGAGCAACAACTGTAAATAAACCAATCGCTTCACTAGCTTGGTAGACATTCAAAATAACAGGAGTCCAGCTGATTCCTTCATCCATGACTCATGGCTTGTTTTTCATGAATGTTTGAGTCATACATGACGACAAACTAAATATATTTATATATAAATATAGGCTGTACTATAAAATTAAATTAAGATCCATTTCTTTTAAATTTATAGCGGAGTTTTTTTTTAATGAGGCAGCAACGTATGATAGATAGGACAGAACAAAAAAATGCTATTAACAATCTTTCATTGCGCAAAAGTAGTATAATATTAACGGCTCCCATACAGAGCGGCACAAAGTGCTTATGCGCATCCCGTGTGCAGAATGATGCGCTTGAAGCATCATGGAGTCACAGCGCGCAGCGGCAGCGCTTCGCATTGAAAAGTTCAAAGCACAAAGTGAAGATATATTGATGCGTATTGTATTACCGGTATCTTTGTCTACAGATGAAGTATAATAATAGAAACATTGAATCATCTTGGAGAGAGTTTCATTGTGTTGACTGTCGTAACCGAACGCAACACGCAGTTTGAATGCTGAATGGAGAATGACTGACAGCCGCAGCGGAGGGAGGAATATACGTGAACTTTAATTTAACGACTTATATATTTATCTGTACCTCAAATTAAATTATGGAATGGCTTCAGAACACTTGGAATATAGTGCATGGAAACTTTATGGTGCTTTTTAATGTTTTTGTGCTTTTTGTGGAGCTTAACAATGACACAGAATATCGCACAATATCGGATTTGGATCGGTCCCATCTGGCCGATACCCTATCCGGCAAAAATGGCAGTATCGGAGTCGATACCCGATCTGAGTATCGGATCGGTGCATCCCTAGTAAATGTTACCGCACCTTTACACAACTAACAATCTCAATATTCGCATAGGGGAATTTCTCTAGCACTGAAAGTCCATCAGACGAAATTCTTTATTATACAGATTCCAATTAAGATTAAAATTACGTAGAGCAATGGTAAATGACCACATCTTTACATGGTAGACAGACATTGATTCATTGATTAAATTGTTGGGGGTCTCCAATCACTGTACTGCAACATTAGAACCAGTGGGAGATGGGTGGAGTGTTTGTTTGGGAAACCTGTTTGATAAAGAATGTTGTTTGTTCATTTTTCAAAAAAGAAAATTGATTTACATGCAGCCTGGTTGTGATTATCAGTTAACTATAAATGCCACGTCATTGTTGTGCTTCTAGACCAAATCAGGAGCAGCTAAGGAGTTGGAGCAGCTCAAGAAGGTTGAGGAGGAAAGAAATGTCCAGAGAGATGTTATCTCACCTCCTCCTACTTCTCCTCTTGCTTTTGTGCCTCCCCCACCTCCAGCTTTCAGTCCTCCACCACCTCCCCCTTTAGCTCCAGCCAAGCCCCCTCTAGTGCTGCCTGCTGGAGGAAACCCAGAGGCGGCCCGAGAGGCTCTTCTGGATGCCATTCGCTCAGGCTCTGGGGCTCAACGACTGAGGAGGGTAAGAGGTTCATTATTGCCCTCACTTATGAGATTTGAGTTAAATTTACTACATTTTGTTATTTTACTATTCTTCCATAAAATTATAGACAATAACACAACAGGCATCAGCATACAAAAGTTACTATAATTATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_11161373_11165449.mRNA True 4163 mRNA 0.41 5 11159368 11165449

Neighbor

gene id symbol gene type direction distance location
CI01000016_11034620_11091604 GRB10B, GRB10 coding downstream 67764 11034620 ~ 11091604 (-)
CI01000016_10989691_11026452 NA coding downstream 132916 10988377 ~ 11026452 (-)
CI01000016_10970952_10971167 NA coding downstream 188201 10970507 ~ 10971167 (-)
CI01000016_10931329_10940939 ENTPD3 coding downstream 218315 10930812 ~ 10941053 (-)
CI01000016_10897488_10911334 NA coding downstream 248034 10896186 ~ 10911334 (-)
CI01000016_11167265_11226409 COBL coding upstream 1816 11167265 ~ 11226409 (-)
CI01000016_11353238_11464979 TRIO, TRIOB coding upstream 187284 11352733 ~ 11464979 (-)
CI01000016_11670870_11794943 ADCY2A coding upstream 505369 11670818 ~ 11795083 (-)
CI01000016_11866962_11874982 PAPD7 coding upstream 700535 11865984 ~ 11874982 (-)
CI01000016_11876020_11896223 ICE1 coding upstream 710043 11875492 ~ 11896223 (-)
G100489 NA non-coding downstream 72863 11068849 ~ 11086505 (-)
G100529 NA non-coding downstream 143952 11014694 ~ 11015416 (-)
G100516 NA non-coding downstream 177787 10981218 ~ 10981581 (-)
G100514 NA non-coding downstream 182908 10976154 ~ 10976460 (-)
G100512 NA non-coding downstream 184493 10974646 ~ 10974875 (-)
G100486 NA non-coding upstream 7330 11172779 ~ 11176544 (-)
G100501 NA non-coding upstream 96098 11261547 ~ 11289191 (-)
G100491 NA non-coding upstream 112107 11277556 ~ 11300621 (-)
G100562 NA non-coding upstream 155437 11320886 ~ 11322827 (-)
G100616 NA non-coding upstream 451949 11617398 ~ 11617618 (-)
G100190 NA other downstream 1106979 10051168 ~ 10052389 (-)
G99178 NA other downstream 1344413 9814361 ~ 9814955 (-)
CI01000016_09510177_09512196 ID4 other downstream 1646940 9509622 ~ 9512428 (-)
G98691 NA other downstream 1901757 9256102 ~ 9257611 (-)
G98679 NA other downstream 1919439 9234996 ~ 9239929 (-)

Expression


Co-expression Network